PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz05g21080.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | MYB | ||||||||
Protein Properties | Length: 130aa MW: 15140.4 Da PI: 10.4613 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43 | 1.1e-13 | 11 | 52 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g+W ++Edell+ +lG++ W+ +a++++ gRt+ qc rw+ Cz05g21080.t1 11 GAWEKDEDELLYLWQGKLGNK-WSEVAKHIP-GRTGQQCAQRWR 52 89*******************.*********.***********8 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 9.6e-17 | 61 | 107 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r++WT++Ed l+++v+ +G g+W+ Iar + gRt+ qc rw+ +l Cz05g21080.t1 61 RDKWTEDEDNTLIELVRSYGIGRWADIARQLS-GRTDQQCMGRWRRHL 107 79******************************.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MVNNPFSVKT GAWEKDEDEL LYLWQGKLGN KWSEVAKHIP GRTGQQCAQR WRHKVNPNIK 60 RDKWTEDEDN TLIELVRSYG IGRWADIARQ LSGRTDQQCM GRWRRHLDPS IRRVRPVLLL 120 LLLLPLPSS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 1e-24 | MYB family protein |