PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz05g08160.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | GATA | ||||||||
Protein Properties | Length: 807aa MW: 89413.1 Da PI: 7.9449 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.1 | 1.9e-16 | 742 | 776 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 CsnC+tt+T+lWRr++ LCnaCG+y r +g+ Cz05g08160.t1 742 CSNCKTTETSLWRRDKVTDLPLCNACGIYMRDHGV 776 ****************99999************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 807 aa Download sequence |
MDFSHKPLTS WAPEDKQTFL FGVFLFNKDF NLIHMLLPDK QVHDVVSFYY TTFKYSHAHA 60 CWKGLRSVGF QGACLVSGSR QYMTLNRLAQ EAHLSDEQYD VMCSAGQRYH LGQSTLGDLV 120 NSLVSVAGAP ALVKAVPLTE YGVPQEGLSF ELISMSDVLH NIQKSESKIA VFSHLCQEVA 180 AKGWKCDQAN QKSDVTLQSA AQPEISYTAP LMMNYPHPLT FASTKEAVGF LLDQDSQVLV 240 DAVLRFRSQL AQSKLASFMV NEHAIHQECD DTHADATCTI APVSLVTAKG SHKKVPLPGP 300 AQHMCVNCCI DTSRCWRKDK HTGLYLCNAC AVYKRDNGRH RPEALFTTRI THTVKVDDQT 360 PSPRTPQALP PTRFCATPTS AVSAAPTTHN YPFGKAVATS GASSCSPIPK QNELDGMQHT 420 SDHNGLVPST FNQKARLGRM TPLSSWRMNS HDLVAGSQYA AVRPQAFPSG SQYTLQSVLP 480 PDHVDSGEVS DDDDSGWPAV ELMRGTRKPR TKPTRQPKRY KVFQLTAASY EPNQGTHIPD 540 LNHMEDVGVC HVFVNHHNAL NPDYGKDMGT SSSVGSQPWT VSPCQNPEYN MVHDSWAEFR 600 KPVAVGVLQP DNQMVCNSHD VALEALLQQL VTSDSDATEQ AAYDALHNMK YDTFTGISCH 660 RPDMHSTEYR GLEACRGLQH VRYPSRTAFG QPCSPAWTKL GLTDSWSNMC MTRPHGQSNM 720 SLCQDHMVKV RFQRPLRTGK VCSNCKTTET SLWRRDKVTD LPLCNACGIY MRDHGVPRPA 780 PFRSGRYGMV ARKRQRVVYE ASSSPS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26930.1 | 3e-07 | GATA family protein |