PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz05g03270.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

AP2

Protein Properties

Length: 850aa MW: 88075.6 Da PI: 6.0293

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz05g03270.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.4	3.2e-12	251	300	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+w+kk++rW A I + k+ +lg++ ++++Aa+a ++a+ k++g Cz05g03270.t1 251 SRFRGVCWNKKNKRWQAAINS------SgKYLYLGSYLSEDDAARAFDKAAIKIRG 300 789*************888......44******99***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 850 aa Download sequence
MEQPDLVAQE QYQQDNGARG NQAQYHGDED HEAEARYQQQ HIMSRHPGAY AHHGYQRSQA 60 SHHQQHEAET DGQGGQSVSA EVQAAAALAA AAAGFRGGHH DEGIDQMGMD GQDPGQPEHS 120 EGGGHVNHHT HHSASPDDQP GSADWEGSQD MAGDAANQMA QMAQLRAQVR SPVGTTVTSM 180 TPGYEALAGR GINIEALNSL MAGAGAVPGG MAALSEQLQG NYEEGQDPDQ LASGHPGTKS 240 YTQSSNKQLS SRFRGVCWNK KNKRWQAAIN SSGKYLYLGS YLSEDDAARA FDKAAIKIRG 300 RKAKLNFQYA DYVDANGNLL DDDFKLPVKD EKPPEQGGRS DGLAYLSNMA GSLMPAGGFY 360 DSSPFSGNAT TYRANPAGNV IFSGSGYSQA DAAAVAASLS QHGGMDRQGG GLYGVDGERN 420 GGTPGKRLLS DVYSGLPLLG GAQGGQGRSG AQGRSSADGA GGAKQSGRQM GAVVSSVVSK 480 PLAFGDVKQH LAAGNTVEFI VPQEESDICG VVYKNETSGQ KGCGVWNGYR LFDFGLFSEE 540 ADAKQAVTQA MTMLHDDRIM VLQALQQGAA AAAAAAAAAA AASGNQGLHG EAASGAGRGR 600 GRQRAPHKAL DDSGAGTLGV GLAHQGHGAE GPAMMSVPPL GASGRGRMTS SAGAAGHPGL 660 NQDGMSKSSS AMGMAEAAAA AVAGMSYPSL GMLSGANKQG PAYNHDIGWM SNSEQGRSAE 720 EELEMRLQAL AQERNVGPDG LIHHHIPSSM LLAASNTANQ MQLQSDSEQA GGRGQGEFPE 780 DMGPTMKRGR INLGLEGGDV NGNKRMRDVP PGGPPPVGGL GMDFSAMEKL SGVRLQDALK 840 QLFEAAKHN*

Sequence ? help Back to Top

Protein Sequence Length: 850 aa Download sequence

MEQPDLVAQE QYQQDNGARG NQAQYHGDED HEAEARYQQQ HIMSRHPGAY AHHGYQRSQA  60
SHHQQHEAET DGQGGQSVSA EVQAAAALAA AAAGFRGGHH DEGIDQMGMD GQDPGQPEHS  120
EGGGHVNHHT HHSASPDDQP GSADWEGSQD MAGDAANQMA QMAQLRAQVR SPVGTTVTSM  180
TPGYEALAGR GINIEALNSL MAGAGAVPGG MAALSEQLQG NYEEGQDPDQ LASGHPGTKS  240
YTQSSNKQLS SRFRGVCWNK KNKRWQAAIN SSGKYLYLGS YLSEDDAARA FDKAAIKIRG  300
RKAKLNFQYA DYVDANGNLL DDDFKLPVKD EKPPEQGGRS DGLAYLSNMA GSLMPAGGFY  360
DSSPFSGNAT TYRANPAGNV IFSGSGYSQA DAAAVAASLS QHGGMDRQGG GLYGVDGERN  420
GGTPGKRLLS DVYSGLPLLG GAQGGQGRSG AQGRSSADGA GGAKQSGRQM GAVVSSVVSK  480
PLAFGDVKQH LAAGNTVEFI VPQEESDICG VVYKNETSGQ KGCGVWNGYR LFDFGLFSEE  540
ADAKQAVTQA MTMLHDDRIM VLQALQQGAA AAAAAAAAAA AASGNQGLHG EAASGAGRGR  600
GRQRAPHKAL DDSGAGTLGV GLAHQGHGAE GPAMMSVPPL GASGRGRMTS SAGAAGHPGL  660
NQDGMSKSSS AMGMAEAAAA AVAGMSYPSL GMLSGANKQG PAYNHDIGWM SNSEQGRSAE  720
EELEMRLQAL AQERNVGPDG LIHHHIPSSM LLAASNTANQ MQLQSDSEQA GGRGQGEFPE  780
DMGPTMKRGR INLGLEGGDV NGNKRMRDVP PGGPPPVGGL GMDFSAMEKL SGVRLQDALK  840
QLFEAAKHN*