PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz05g03080.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

AP2

Protein Properties

Length: 1059aa MW: 111384 Da PI: 6.5118

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz05g03080.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.9	1e-12	113	162	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+w+kk++rW + I + ++ +lg+f +eeAa+a ++a++k++g Cz05g03080.t1 113 SRFRGVCWNKKNKRWQSAINS------SgRYLYLGSFIGEEEAARAFDKAALKIRG 162 789***********99888......44**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1059 aa Download sequence
MSSDNPENQV DSEFEQEQNR GNSQQHPQQR QPFQRDQQQQ HRRAQLSNQQ DDEEALQPPS 60 QQRQLHPGNA DSSNDGGAFE ATAEGGQAEG SQGGDGPSNT NIFGLPSNKK LTSRFRGVCW 120 NKKNKRWQSA INSSGRYLYL GSFIGEEEAA RAFDKAALKI RGIKAKLNFP LEDYLDANGQ 180 VVEDEHLNEI IAMHERLANT QRVAAAQALA LAGLPQSKRS AHLAGLSSDS LVILQQAGKL 240 VKQQFKGGEP GPQGGLNVST PQGNIPGSIR TASPGMGTAA VAAGIHSRQQ AALAAAKEYW 300 NHLGGAPAPL PPHNAGGGGG AGANMYLGGN IEAHPKLLSQ YGEAAANALK AADLAQDSLS 360 YRSASLQGIH ELSSSMLSQL QQQQPPPTSM TASHHVSHES VGGRTGINIS RLTQHLPRGV 420 TLEHIMPGEM GVCGVLYITA PPHQLMGAAV WDGSKCHEAG IYDTERDARQ ACHFGMAIAA 480 HFVRLEQTQA LAAAAVSASL RRGNSLGPYM PQTNVCGGGM DAMAIDARGT NSGMHGSRGL 540 GAHLSQNVPQ LHQPHPAPTH PPQHQHQHQH QRNVPSNGIQ QVDSREQSLF SGLPLPSVNP 600 SLLASLGLGA APRAGSYAGF GGLSASMQAG LEDEGMVLPQ TDSTTVDFST LSHANNAPQN 660 QPRAQGLGSL GLAGKSSFTA TAMSGLGDAQ TITQSLQKLL EVPSGTATIN GDVVQLFRSG 720 GRSGAGRGSL GGPFEGKQAS KEHSGGDRDS EGFEDLPPRK RKHLFQEDNP RPSSRPAVAD 780 MGANRGSAAG LDLRGSGYPS ASMMERAQQL VAEGIDNGEV MLPTTSSSTN PVLLPGRSVE 840 STGVTIEPSV HVSEETAARL NAFIATLEQH QQQQQERPTA SAKSPLREAT APPAHTTKTA 900 AANNAASEGG RDTSGSAGVD QQGLGGMDSN NPSIKIVLPP GVLSMIKNTS SLEEIVALLS 960 QSQSQDRQVD QAPRLSDDGH NVGQRLQRSN PGSGLGLNPD AEDAEQHAEE QQAGAVADLL 1020 HRKRPWGNEH QDWGGSSRGL NFRRGSPDHG DADEDNSD*

Sequence ? help Back to Top

Protein Sequence Length: 1059 aa Download sequence

MSSDNPENQV DSEFEQEQNR GNSQQHPQQR QPFQRDQQQQ HRRAQLSNQQ DDEEALQPPS  60
QQRQLHPGNA DSSNDGGAFE ATAEGGQAEG SQGGDGPSNT NIFGLPSNKK LTSRFRGVCW  120
NKKNKRWQSA INSSGRYLYL GSFIGEEEAA RAFDKAALKI RGIKAKLNFP LEDYLDANGQ  180
VVEDEHLNEI IAMHERLANT QRVAAAQALA LAGLPQSKRS AHLAGLSSDS LVILQQAGKL  240
VKQQFKGGEP GPQGGLNVST PQGNIPGSIR TASPGMGTAA VAAGIHSRQQ AALAAAKEYW  300
NHLGGAPAPL PPHNAGGGGG AGANMYLGGN IEAHPKLLSQ YGEAAANALK AADLAQDSLS  360
YRSASLQGIH ELSSSMLSQL QQQQPPPTSM TASHHVSHES VGGRTGINIS RLTQHLPRGV  420
TLEHIMPGEM GVCGVLYITA PPHQLMGAAV WDGSKCHEAG IYDTERDARQ ACHFGMAIAA  480
HFVRLEQTQA LAAAAVSASL RRGNSLGPYM PQTNVCGGGM DAMAIDARGT NSGMHGSRGL  540
GAHLSQNVPQ LHQPHPAPTH PPQHQHQHQH QRNVPSNGIQ QVDSREQSLF SGLPLPSVNP  600
SLLASLGLGA APRAGSYAGF GGLSASMQAG LEDEGMVLPQ TDSTTVDFST LSHANNAPQN  660
QPRAQGLGSL GLAGKSSFTA TAMSGLGDAQ TITQSLQKLL EVPSGTATIN GDVVQLFRSG  720
GRSGAGRGSL GGPFEGKQAS KEHSGGDRDS EGFEDLPPRK RKHLFQEDNP RPSSRPAVAD  780
MGANRGSAAG LDLRGSGYPS ASMMERAQQL VAEGIDNGEV MLPTTSSSTN PVLLPGRSVE  840
STGVTIEPSV HVSEETAARL NAFIATLEQH QQQQQERPTA SAKSPLREAT APPAHTTKTA  900
AANNAASEGG RDTSGSAGVD QQGLGGMDSN NPSIKIVLPP GVLSMIKNTS SLEEIVALLS  960
QSQSQDRQVD QAPRLSDDGH NVGQRLQRSN PGSGLGLNPD AEDAEQHAEE QQAGAVADLL  1020
HRKRPWGNEH QDWGGSSRGL NFRRGSPDHG DADEDNSD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G39250.1	8e-12	AP2 family protein