PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz04g37130.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | NF-YB | ||||||||
Protein Properties | Length: 138aa MW: 14834.7 Da PI: 5.3236 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 179.1 | 4.1e-56 | 11 | 106 | 1 | 96 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 vreqdrflPian+srimkk+lPanaki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+ tlGf+dy+epl++yl+k+re+e++ Cz04g37130.t1 11 VREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMKTLGFDDYLEPLTLYLAKFREAEQA 106 69******************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MSGDGDDGGS VREQDRFLPI ANISRIMKKA LPANAKIAKD AKETVQECVS EFISFITSEA 60 SDKCQREKRK TINGDDLLWA MKTLGFDDYL EPLTLYLAKF REAEQASLQK QGGALGGNGS 120 GELKREGGPS GSLAKGY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38880.3 | 4e-62 | NF-YB family protein |