PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz04g34070.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

AP2

Protein Properties

Length: 835aa MW: 90082.2 Da PI: 6.5204

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz04g34070.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.1	7.9e-12	47	119	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse...ng..............krkrfslgkfgtaeeAakaaiaarkkleg 55 s + GV+++k++grW+A+I+d + +g k k+++lg+f ta +Aa+a+++a+ ++g Cz04g34070.t1 47 SPFIGVSQYKRTGRWEAHIWDaEVPacgGGkggncsgggaggggKGKQIHLGSFLTALQAARAYDRAAILMRG 119 5689***************8888996226678899999887555********************99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 835 aa Download sequence
MASAESVTNT TTTNRKLSIN SNSSILSSVQ LDLKKRRNRS GPKSKSSPFI GVSQYKRTGR 60 WEAHIWDAEV PACGGGKGGN CSGGGAGGGG KGKQIHLGSF LTALQAARAY DRAAILMRGP 120 DSHLNFPAEE YADDDVLKQL ALLPKREMVL ALRRTVDTET EQEALQAFNK KLPAAFANLL 180 QHLTGLPMLP QLCSTPGKDK PQECQTQCVD AACMPFGAHV MANKKPSQPD WCLTEPTMRK 240 SSVPGKGISR GCHPLNDYTV YSAAVEEHTS SSDNVDTMQH TAAYHGCTGT ACTPVAYQHG 300 CTPSSVQHGS TNNWDMDYNA CSDQQATYMQ HGANFHINAL AGHGYTSPIP HGNDDNIHMN 360 SLHDNTSPPI MTHQALASME YVDQSKFDQP SAMGMATGAG MEHACYFEAV EAWDVITSEG 420 VFPLRPYMDF QNGEGVAVSQ RLPKISTGRM ATTTTYKCEL AHPQSSENMP SRVDGDVSGW 480 WGPTAARCSN PSTTNTPSMM MSHESALHHP KSQHPYGCSR SKMDGVSHQP EDERHTIEHY 540 KHHSLSNQEV DWTTWQQLSS PSPYTVPDMQ CAGLTPLKTP TKAAPQQGCF CQISTPVCPF 600 RETTISTTQM PHLSCIPHAL TNPTKSPFAA ASKQGFSCSG TGTPGGDTSN STPTSGFTPG 660 WYAPVVRCQS PPPPMITPWS PPSTALHGHS TLKSTMPPLT PIQEYQHQLS PSRRHTGDGD 720 NSALITPNAT AITYSAILDS TWVPVCDAAG GAITTVQQQQ ACEQHVASTQ GRNGSAYRET 780 TDLSYDNKAG EGIEIAVHHN TAADHQYLDD LSVGNTEAVL PDNFEWYQLL EDPV*

Sequence ? help Back to Top

Protein Sequence Length: 835 aa Download sequence

MASAESVTNT TTTNRKLSIN SNSSILSSVQ LDLKKRRNRS GPKSKSSPFI GVSQYKRTGR  60
WEAHIWDAEV PACGGGKGGN CSGGGAGGGG KGKQIHLGSF LTALQAARAY DRAAILMRGP  120
DSHLNFPAEE YADDDVLKQL ALLPKREMVL ALRRTVDTET EQEALQAFNK KLPAAFANLL  180
QHLTGLPMLP QLCSTPGKDK PQECQTQCVD AACMPFGAHV MANKKPSQPD WCLTEPTMRK  240
SSVPGKGISR GCHPLNDYTV YSAAVEEHTS SSDNVDTMQH TAAYHGCTGT ACTPVAYQHG  300
CTPSSVQHGS TNNWDMDYNA CSDQQATYMQ HGANFHINAL AGHGYTSPIP HGNDDNIHMN  360
SLHDNTSPPI MTHQALASME YVDQSKFDQP SAMGMATGAG MEHACYFEAV EAWDVITSEG  420
VFPLRPYMDF QNGEGVAVSQ RLPKISTGRM ATTTTYKCEL AHPQSSENMP SRVDGDVSGW  480
WGPTAARCSN PSTTNTPSMM MSHESALHHP KSQHPYGCSR SKMDGVSHQP EDERHTIEHY  540
KHHSLSNQEV DWTTWQQLSS PSPYTVPDMQ CAGLTPLKTP TKAAPQQGCF CQISTPVCPF  600
RETTISTTQM PHLSCIPHAL TNPTKSPFAA ASKQGFSCSG TGTPGGDTSN STPTSGFTPG  660
WYAPVVRCQS PPPPMITPWS PPSTALHGHS TLKSTMPPLT PIQEYQHQLS PSRRHTGDGD  720
NSALITPNAT AITYSAILDS TWVPVCDAAG GAITTVQQQQ ACEQHVASTQ GRNGSAYRET  780
TDLSYDNKAG EGIEIAVHHN TAADHQYLDD LSVGNTEAVL PDNFEWYQLL EDPV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60120.1	2e-15	AP2 family protein