PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz03g32030.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | AP2 | ||||||||
Protein Properties | Length: 505aa MW: 54688.6 Da PI: 6.4728 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47 | 6.5e-15 | 95 | 144 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++++W+++I+d +k+++lg f+ ++ Aaka++ +++k +g Cz03g32030.t1 95 SHYRGVTRHRRTKKWESHIWDN-----KKQVYLGGFDNEQHAAKAHDIMALKCRG 144 79*******************4.....5**********99**********99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence |
MLRTPSHFIF PPPPSDRKNS TIQGNRGVRD AGDPWCSGVP EHQAADLNER FTAVLSSIMR 60 HPIQLHEVNH LHDDISTLHD FDLSKSRRGP PGGSSHYRGV TRHRRTKKWE SHIWDNKKQV 120 YLGGFDNEQH AAKAHDIMAL KCRGVGTIIN FKMPIYDTLI PLLDMVTRDD VVCVLRALSK 180 SAEMKRVAAH HHDMPPTSWG RTRHSTRSKR PAVNRKDGAC MMPHAPAAAA AAAVSGVDDT 240 DVDIASSVTT AGAGATAAGA GFSCHNTILR HPAPPVRRMM PQLQPLSAPP PAVLPPPGMD 300 LGMVHGVLVR HVYQESHEQV DGIPGLPDMR PMLAATLDVP MELSGLLFSG VANMESVPGN 360 SALRAAENAA LQAHTAADIA AWSVNKEALY DSSLTSSDTL NSIMTPTEDM NASGGLSFLT 420 SVQPDYYAVS PFMQHSMDSF HGPNDMLLQS AADFKDDDST LPSNTGLMTD ASMETYGSSG 480 NDLERYSPLM DPFPDTEGWS NLYC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 8e-20 | AP2 family protein |