PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz03g20070.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family bHLH
Protein Properties Length: 389aa    MW: 40590.8 Da    PI: 8.5096
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz03g20070.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.42.3e-12124169454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h ++E+rRR riN++++ Lr+l+P+a     ++ + a  Le++++YI sL
  Cz03g20070.t1 124 RHQAAEQRRRTRINERLDLLRKLVPHA-----ERANTACFLEEVIKYIDSL 169
                    599***********************9.....8***************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MQSSNSATLR SLMSGSGATA EQMIEAARLA SAIGQLPASQ GHGQQNTGSF GSGLTTLAAV  60
PGSSLYPGIE LFSQFGQLFG NQFTDLANWQ NQQNRSGGMS DKLLGSRGKT RSSDSRSSSA  120
YASRHQAAEQ RRRTRINERL DLLRKLVPHA ERANTACFLE EVIKYIDSLK RRNSELEAQL  180
ASLKGSNAAA AAAQPSNQDQ THHEHHVEQA VQPETPSGQP ALDGASNPLA LLSTSQPFSA  240
SAALSALGQL RFDGGSNAVS TLLEQALLQN AINQAAQQAQ QHAQQHAAVA AAAAAVAAAA  300
HQKKPASPPP YGSTLPPELQ RMLLNDSAVP TSSAAATAPT SAPAAANTDT AGGSHDRHRK  360
RDSDDDGESA LSSEESGVPL KKRKMLVL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.15e-09bHLH family protein