PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz03g16250.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

ERF

Protein Properties

Length: 746aa MW: 80162.8 Da PI: 7.7968

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz03g16250.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.1	2.2e-18	48	97	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 g++GVr ++ +g+++AeIrd g ++kr ++g+f taeeAa+a++aa++ l+g Cz03g16250.t1 48 GFRGVRKRP-WGSYAAEIRD----GsCNKRRWIGTFRTAEEAARAYDAAALTLHG 97 89*****.******....6556***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 746 aa Download sequence
MHSHGESMSE DEQAANGGFE HPHQQYSDHT GSPDGAHRPD FPNKNKHGFR GVRKRPWGSY 60 AAEIRDGSCN KRRWIGTFRT AEEAARAYDA AALTLHGSKA RTNFKYSEAT LLTYDSHKLK 120 TKEEIAAALK AVAEGTHLPE PQDAAFHAAV GSRHSAPHDE SAAPHEVQPG AASMRSGREP 180 KPCPAAAGRQ LSRAADHHPT QSDSPSLSHH SHTSLYQESD KPVMPLPSVV RSPSLQHQRR 240 ASTPSRSSGP ARCRQPLGQA PAAFPPAARS RSAGANAAFG YDEDHHGMYV ANHRQARLPL 300 LPHGYTPEQQ HQLHQQMQLL AHGHVHGARG MMDHHPHMVA PGTPPHEHLS ATPPHVRGIV 360 RNEAVTADHP MRPRMQSPQL DLQQTLPLLL ALLASGNGAH AAALGLDGVD LEGLIHQLGG 420 TVPHPGGRGT APHVVGADMA HHAQMDVSHH QAPRQSLHHQ AAGQSEFDDD ELFNIMNAPR 480 AKRTMSSSSG HIRRESSGGV NGSTLHSTAD HKIKKQPGHP AHATHQRNTA AMIKSDLGGQ 540 ANGFGLHAKQ EVRLSRFGRH SQGVSHKHLP HDDPAQSWFG QQQVGSFEPH PMQVGRQGSG 600 CLGASVKLPR SVSDTGIPPQ RVDRFQAAAS SLRQPIQAAH PMMADYQPME PVSSNAAYKE 660 DGQILFKRMN DSAHIASHPR QPRHVQGLTS SPSGPHTPGP EQDTAAGNPA ELGSDEDGSV 720 MGPRLDALAT IAAMMCDGDL TDDEQ*

Sequence ? help Back to Top

Protein Sequence Length: 746 aa Download sequence

MHSHGESMSE DEQAANGGFE HPHQQYSDHT GSPDGAHRPD FPNKNKHGFR GVRKRPWGSY  60
AAEIRDGSCN KRRWIGTFRT AEEAARAYDA AALTLHGSKA RTNFKYSEAT LLTYDSHKLK  120
TKEEIAAALK AVAEGTHLPE PQDAAFHAAV GSRHSAPHDE SAAPHEVQPG AASMRSGREP  180
KPCPAAAGRQ LSRAADHHPT QSDSPSLSHH SHTSLYQESD KPVMPLPSVV RSPSLQHQRR  240
ASTPSRSSGP ARCRQPLGQA PAAFPPAARS RSAGANAAFG YDEDHHGMYV ANHRQARLPL  300
LPHGYTPEQQ HQLHQQMQLL AHGHVHGARG MMDHHPHMVA PGTPPHEHLS ATPPHVRGIV  360
RNEAVTADHP MRPRMQSPQL DLQQTLPLLL ALLASGNGAH AAALGLDGVD LEGLIHQLGG  420
TVPHPGGRGT APHVVGADMA HHAQMDVSHH QAPRQSLHHQ AAGQSEFDDD ELFNIMNAPR  480
AKRTMSSSSG HIRRESSGGV NGSTLHSTAD HKIKKQPGHP AHATHQRNTA AMIKSDLGGQ  540
ANGFGLHAKQ EVRLSRFGRH SQGVSHKHLP HDDPAQSWFG QQQVGSFEPH PMQVGRQGSG  600
CLGASVKLPR SVSDTGIPPQ RVDRFQAAAS SLRQPIQAAH PMMADYQPME PVSSNAAYKE  660
DGQILFKRMN DSAHIASHPR QPRHVQGLTS SPSGPHTPGP EQDTAAGNPA ELGSDEDGSV  720
MGPRLDALAT IAAMMCDGDL TDDEQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12980.1	2e-13	ERF family protein