PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cz03g00070.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 219aa MW: 22678.8 Da PI: 10.505 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.9 | 3.6e-05 | 70 | 90 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg++F r++ L+ H r++ Cz03g00070.t1 70 PCGVCGRTF-RPEALVIHARSC 90 6********.**********98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 219 aa Download sequence |
MMSHSLPIHI PQCQQKWVRQ QNTQLAGQHR PLPPTPDELA DGGVLPKTKA DIEIFNAKMF 60 DIYNQLSLVP CGVCGRTFRP EALVIHARSC RTDATGSATS AAKTIKAGNG STAGKNGPAY 120 KAIKKPGHPA TAGTKAGRST TSLSKSADFG RIPSTAPSST AVTPNMKLTA GNTAAAKTGG 180 AYGRSNMSAS ADFGSGGISQ KPRGYVCCLC GQQYGSKR* |