PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz02g34190.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

ERF

Protein Properties

Length: 566aa MW: 58841.4 Da PI: 5.4579

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz02g34190.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.1	2.9e-20	141	189	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp + +r +lg+f+taeeAa+a++aa+++++g Cz02g34190.t1 141 YRGVRQRP-WGKWAAEIRDP-----TvgARRWLGTFDTAEEAARAYDAAARAIRG 189 9*****.******9.....4459*********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MDTGLQPVMA DRPGTLGDVS SAPIPSAIPA VGTTAPTIAA VSSGPPASLS VPATALGAPI 60 AAPTPMTLPV DSAPGGSPAG SATGAIPVGL ADAGASPVKK EQCEPATAEA ADKDDIEAAT 120 PLIPSGVPPA VVVSKGKNKT YRGVRQRPWG KWAAEIRDPT VGARRWLGTF DTAEEAARAY 180 DAAARAIRGP AARCNFPLPE EMSQQQVEEA VKAEQERLKR TTEEKGKAAE GKGRPAKSNI 240 RKSVRKQAAT PELVQESHMA TSFDETHLIH EPMRGYLAAA DITGAMAVTE AMAMHQFSVN 300 GSSPTVLFMQ QAKGAALLPE WPPAASVSSL GISPRLAFGT PPFGKSVDMV DVCTQLMEAG 360 GVDTMNMGSL RNELLMPHMH QHLAARGILE EEEDDLDQEM MILGNTPNFG AGGSFLKASP 420 TVLGSMPPPA PRPRPGPSGS GNSFINSILS NGPLHHQNGA PTGPGQQQPA PGTSSAAAVP 480 QQRHQPHQHR LLFDEDETSE ETSDDDDDMM GMSPEIPSII MAAAAARPAA TSLVPPNVFR 540 NAFRLHGQGP GINPWAAPVD LHATR*

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MDTGLQPVMA DRPGTLGDVS SAPIPSAIPA VGTTAPTIAA VSSGPPASLS VPATALGAPI  60
AAPTPMTLPV DSAPGGSPAG SATGAIPVGL ADAGASPVKK EQCEPATAEA ADKDDIEAAT  120
PLIPSGVPPA VVVSKGKNKT YRGVRQRPWG KWAAEIRDPT VGARRWLGTF DTAEEAARAY  180
DAAARAIRGP AARCNFPLPE EMSQQQVEEA VKAEQERLKR TTEEKGKAAE GKGRPAKSNI  240
RKSVRKQAAT PELVQESHMA TSFDETHLIH EPMRGYLAAA DITGAMAVTE AMAMHQFSVN  300
GSSPTVLFMQ QAKGAALLPE WPPAASVSSL GISPRLAFGT PPFGKSVDMV DVCTQLMEAG  360
GVDTMNMGSL RNELLMPHMH QHLAARGILE EEEDDLDQEM MILGNTPNFG AGGSFLKASP  420
TVLGSMPPPA PRPRPGPSGS GNSFINSILS NGPLHHQNGA PTGPGQQQPA PGTSSAAAVP  480
QQRHQPHQHR LLFDEDETSE ETSDDDDDMM GMSPEIPSII MAAAAARPAA TSLVPPNVFR  540
NAFRLHGQGP GINPWAAPVD LHATR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33710.1	2e-15	ERF family protein