PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz02g27040.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

CPP

Protein Properties

Length: 1410aa MW: 145837 Da PI: 8.6265

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz02g27040.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42.7	1.1e-13	516	552	4	41
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++C+Ckks+Clk+YC+Cfa+g +C++ C C dCkN++ Cz02g27040.t1 516 RSCHCKKSQCLKLYCDCFAKGMYCTN-CLCLDCKNTKA 552 68**********************.******986 PP
2	TCR	47.9	2.7e-15	583	621	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +kkgCnC+ks+ClkkYCeC++ ++ C++ CkC +CkN e Cz02g27040.t1 583 SKKGCNCRKSHCLKKYCECYQMNVRCGSMCKCVECKNLE 621 689**********************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 1410 aa Download sequence
MRRRRRRSSK AKAQARSSST PSTNHMAASE TVAPIARTPE KPKPAISGLS MLASPELGSP 60 RLFSPSHLHL PLFQASPIRR APVSPAHHYS GLAEFIQSPL RTPGGAHLNP GDLLNFDTPC 120 SKQASLAHGF FSPSPHKRQS RLATGSGHQS SPLHLGQFDW GDLHLVKPAG GGFTPDHHTY 180 AVNQHGGVDD AADLLSDILQ SPGAKEDRPV TRSRSGGAHT RRRCLDFSKA DGAGPRLGAD 240 LLHSHAPGSP ALISPYTVTH SQVAAATVAL LAAAAGGQPS QYGAASLPAS DQLNAPAMQP 300 HVRTRGLGQQ DTSVMIPLQQ DGALFAGQQM LLPEDDPQML MAQESLSSDS DHKEQLDPAL 360 AVAEQTTAET HHAYTGAAAT SASEAMPADN TAQPPAYKRG GAGRTGVQYS IVQQAVANAA 420 AAAGAAGRRA ARAQLPVSEP TVLAEVAQPP QQASQLSPDD PPKSLPGAAL QQQQQLHSAI 480 PTPDTRIPHT SESPMSVVPP VTPDDARKRD SSIVARSCHC KKSQCLKLYC DCFAKGMYCT 540 NCLCLDCKNT KANSELVMER RQCIKQRDPE AFSNKLREDK VSSKKGCNCR KSHCLKKYCE 600 CYQMNVRCGS MCKCVECKNL ETPGAENPTA PTARLQHPSV DWHVSPAAGV TSTPPLSRTV 660 HQVHSTPQAQ AAPVAPVMLR IALPGPSTPV SAPMVYFPMQ TPLAPDGSMA VLQGLSTGLS 720 GERGSGASQQ TFAPVTSTPA VSIALEATPA SVPVSFESNY WQRQLVKSED EDDGEKENSG 780 HVQEQPAAKA AAQPAASEPL QLATPEQAAA QTPLLAAGTP SSRASSTVSV QSMPNTRLRH 840 RLSTVSTGDV HKPQAAQLGG VSPDAAAAAA APGVAAGMTT RGRQAKLKVE ADDDKYVAIP 900 DSKQGTSTQH QPHAKVHQQQ QHHQQHRQQH QHQQDQQQQV SSSSSKALMP PPPPLRRGAA 960 AGQPSAVVMP GAASVPVPTA VLPGQGLLTS ALTAAGIEPV SGPSACSSTT VSPAAAAAAA 1020 ATTPAGHIIQ LGVNGPLLQL PPEYLAPNAA PVAMNTTATA VAGDGAQGQI GLLLYIGDER 1080 GKVSTFYVPT LQQAIPSSVA QPTAVVAAQP RLPAGSTAPA AVVAALDVSD TTHTANVTVA 1140 YPASAPIVMD PGAAVAAAAY CGDSGMTSSS GMGATASDDS LSHHAALEYL EQQQYGTQES 1200 QAPSTPFTGA ATATAAAAAG VPDQPAPKLS TPVKRKVADT GGNISTHTEM SEGASPLKLH 1260 SGARSTAASP AHPTHSHTPL APCSAANAMM MALSPTMQQP IPMGYVLLAG RKGVQYAAPV 1320 SAAGNVGVPM IPGYVGTMSS GMVEVSGGSN KQQPLNGMQS PKKGLLTPSK RTGQFMAGSS 1380 KLSSPTLFRF APGSTTVMPS PPQPRPRQI*

Sequence ? help Back to Top

Protein Sequence Length: 1410 aa Download sequence

MRRRRRRSSK AKAQARSSST PSTNHMAASE TVAPIARTPE KPKPAISGLS MLASPELGSP  60
RLFSPSHLHL PLFQASPIRR APVSPAHHYS GLAEFIQSPL RTPGGAHLNP GDLLNFDTPC  120
SKQASLAHGF FSPSPHKRQS RLATGSGHQS SPLHLGQFDW GDLHLVKPAG GGFTPDHHTY  180
AVNQHGGVDD AADLLSDILQ SPGAKEDRPV TRSRSGGAHT RRRCLDFSKA DGAGPRLGAD  240
LLHSHAPGSP ALISPYTVTH SQVAAATVAL LAAAAGGQPS QYGAASLPAS DQLNAPAMQP  300
HVRTRGLGQQ DTSVMIPLQQ DGALFAGQQM LLPEDDPQML MAQESLSSDS DHKEQLDPAL  360
AVAEQTTAET HHAYTGAAAT SASEAMPADN TAQPPAYKRG GAGRTGVQYS IVQQAVANAA  420
AAAGAAGRRA ARAQLPVSEP TVLAEVAQPP QQASQLSPDD PPKSLPGAAL QQQQQLHSAI  480
PTPDTRIPHT SESPMSVVPP VTPDDARKRD SSIVARSCHC KKSQCLKLYC DCFAKGMYCT  540
NCLCLDCKNT KANSELVMER RQCIKQRDPE AFSNKLREDK VSSKKGCNCR KSHCLKKYCE  600
CYQMNVRCGS MCKCVECKNL ETPGAENPTA PTARLQHPSV DWHVSPAAGV TSTPPLSRTV  660
HQVHSTPQAQ AAPVAPVMLR IALPGPSTPV SAPMVYFPMQ TPLAPDGSMA VLQGLSTGLS  720
GERGSGASQQ TFAPVTSTPA VSIALEATPA SVPVSFESNY WQRQLVKSED EDDGEKENSG  780
HVQEQPAAKA AAQPAASEPL QLATPEQAAA QTPLLAAGTP SSRASSTVSV QSMPNTRLRH  840
RLSTVSTGDV HKPQAAQLGG VSPDAAAAAA APGVAAGMTT RGRQAKLKVE ADDDKYVAIP  900
DSKQGTSTQH QPHAKVHQQQ QHHQQHRQQH QHQQDQQQQV SSSSSKALMP PPPPLRRGAA  960
AGQPSAVVMP GAASVPVPTA VLPGQGLLTS ALTAAGIEPV SGPSACSSTT VSPAAAAAAA  1020
ATTPAGHIIQ LGVNGPLLQL PPEYLAPNAA PVAMNTTATA VAGDGAQGQI GLLLYIGDER  1080
GKVSTFYVPT LQQAIPSSVA QPTAVVAAQP RLPAGSTAPA AVVAALDVSD TTHTANVTVA  1140
YPASAPIVMD PGAAVAAAAY CGDSGMTSSS GMGATASDDS LSHHAALEYL EQQQYGTQES  1200
QAPSTPFTGA ATATAAAAAG VPDQPAPKLS TPVKRKVADT GGNISTHTEM SEGASPLKLH  1260
SGARSTAASP AHPTHSHTPL APCSAANAMM MALSPTMQQP IPMGYVLLAG RKGVQYAAPV  1320
SAAGNVGVPM IPGYVGTMSS GMVEVSGGSN KQQPLNGMQS PKKGLLTPSK RTGQFMAGSS  1380
KLSSPTLFRF APGSTTVMPS PPQPRPRQI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	2	7	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16160.1	9e-29	CPP family protein