PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz02g12190.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | GATA | ||||||||
Protein Properties | Length: 384aa MW: 40626.5 Da PI: 8.2684 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.7 | 2.1e-15 | 53 | 87 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C+tt+ p+WR+gp g +LCnaCG+++ ++g+ Cz02g12190.t1 53 CDWCHTTSAPQWRKGPAGFDSLCNACGVRFSRTGT 87 99****************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence |
MTAGAVDTLN KRSRKQTAKM LEAHTFSLSN DHKLRAPAVP STIQKDKLSN MLCDWCHTTS 60 APQWRKGPAG FDSLCNACGV RFSRTGTLDR VTKHMKGVHD RPAWKPATRG STGRPSKARA 120 ASSDSRPRIR RRTMTAGAAS SHPNNRKVDG QAACSMLGSG LCGVQQQQVP CPLLDHLADI 180 ASELSEAESF SEDARQEDHT PTVSDVQQNA TSMPASPNRR SCITARQLHC DQSLSLGLSR 240 FAQQAEAGNT GSPALQATSL GGIGMHATSD GEGDGDDVCR SPSPRTMSAA DSLRQLQTSE 300 QLSYSDEAAS YGTAAAAQAA NNQQGHPPCP PLGCFSLMQP DAMLVQYMNM PSTVMLVAPA 360 GHQCGVHTSY TLQGLVALAA SLL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08010.2 | 3e-09 | GATA family protein |