PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz02g09060.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

Protein Properties

Length: 782aa MW: 84395.9 Da PI: 6.6178

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz02g09060.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.5	1.6e-15	662	727	33	96
-SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 33 sktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + ++ + de g++W +++ ++++++ lt+GW++F++a++L++gD+vvF++ g+++++l+v++ Cz02g09060.t1 662 KEEIYVIDEAGKRWALQYEGvaCNQQRHLRLTSGWRDFARAHHLDVGDTVVFERRGTDRKTLYVTI 727 458*************6667999999***********************9998999899876 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MVPLPVSSSL ELLGTLDSFD PLDLADMVFD KDSCSGSAQQ KSTSQASAHS VDTLQHQYSG 60 EHIDSAADLV HSCSPAAALD DLTAPEFQPA SRPSVVPRTQ SCALQQPQPI PSFSFPQTYP 120 LAGHVCPVEG ALAGSTHQQH PSRVRVFAPD DLASIQDAAN SLGLDLDTAV VRQLMRRQLQ 180 HQMPAREPSP PHYHPSSMRA ADHPAAQPFN TPNVYLTYPT AVLLLDVLKK CEGVSPHDRN 240 HFADLISRLA ARGRETQYSH DSMDRFYSSR SPSVDPSPFA CLPQLGSIME PDILGDFHTV 300 NATGHGGAYN FGQPTGHSNG SSMHRMHTSQ HNSFRGMHAC SDHPMQLGAP CMDDPTVLDD 360 REAAHYPSAS YYHSGRPYAS GPQNQGSFSD AFSDVLLPEP ARDGGSAAGS PMIPPLTRAA 420 SMPESAVAAA GHHASGVVPG AACSYHPAQM LDQPQPAYAQ DLLSGHEDVL EDFFQDVEEQ 480 LSQELSVGHA LNSGVGSPAS FETVVKAGLA NVNQTRNYAN PTQQQDLGQE GLGYSSPVLA 540 KKTGVRKARK PHRPRTAFES HVLSIKQEPT KQATTGQINK QQVAVPIKPE VTDAKKKPSP 600 TSTGSSSYTR VITCKTYLKR LNITQPMAEH LLPPQPRAYG AWNSACDGST AGHAGSYEQL 660 FKEEIYVIDE AGKRWALQYE GVACNQQRHL RLTSGWRDFA RAHHLDVGDT VVFERRGTDR 720 KTLYVTIQHL METARKSSGT TSDDDDDAET AMTACGVKRR KASTMGAIKI RAALGKGQCD 780 E*

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MVPLPVSSSL ELLGTLDSFD PLDLADMVFD KDSCSGSAQQ KSTSQASAHS VDTLQHQYSG  60
EHIDSAADLV HSCSPAAALD DLTAPEFQPA SRPSVVPRTQ SCALQQPQPI PSFSFPQTYP  120
LAGHVCPVEG ALAGSTHQQH PSRVRVFAPD DLASIQDAAN SLGLDLDTAV VRQLMRRQLQ  180
HQMPAREPSP PHYHPSSMRA ADHPAAQPFN TPNVYLTYPT AVLLLDVLKK CEGVSPHDRN  240
HFADLISRLA ARGRETQYSH DSMDRFYSSR SPSVDPSPFA CLPQLGSIME PDILGDFHTV  300
NATGHGGAYN FGQPTGHSNG SSMHRMHTSQ HNSFRGMHAC SDHPMQLGAP CMDDPTVLDD  360
REAAHYPSAS YYHSGRPYAS GPQNQGSFSD AFSDVLLPEP ARDGGSAAGS PMIPPLTRAA  420
SMPESAVAAA GHHASGVVPG AACSYHPAQM LDQPQPAYAQ DLLSGHEDVL EDFFQDVEEQ  480
LSQELSVGHA LNSGVGSPAS FETVVKAGLA NVNQTRNYAN PTQQQDLGQE GLGYSSPVLA  540
KKTGVRKARK PHRPRTAFES HVLSIKQEPT KQATTGQINK QQVAVPIKPE VTDAKKKPSP  600
TSTGSSSYTR VITCKTYLKR LNITQPMAEH LLPPQPRAYG AWNSACDGST AGHAGSYEQL  660
FKEEIYVIDE AGKRWALQYE GVACNQQRHL RLTSGWRDFA RAHHLDVGDT VVFERRGTDR  720
KTLYVTIQHL METARKSSGT TSDDDDDAET AMTACGVKRR KASTMGAIKI RAALGKGQCD  780
E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	1e-06	B3 family protein