PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cz02g00140.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
|
||||||||
Family | CPP | ||||||||
Protein Properties | Length: 771aa MW: 78662.5 Da PI: 7.8743 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 44.4 | 3.2e-14 | 59 | 96 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCk+s+Clk+YCeCfa+g++C++ C+C +C+N++ Cz02g00140.t1 59 SRKQCNCKNSRCLKLYCECFASGRYCDN-CNCVNCFNNK 96 679************************9.********97 PP | |||||||
2 | TCR | 52.6 | 9.1e-17 | 142 | 181 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +++kgCnCkks ClkkYCeCf+ag Cse CkC dCkN e Cz02g00140.t1 142 RHTKGCNCKKSYCLKKYCECFQAGIVCSEMCKCIDCKNYE 181 589***********************************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 771 aa Download sequence |
MVSSMSSGGY QQLPAGSGAP SYRATAATPP AGAQLQQNMI KTPGSRKSSQ VSGPPQKNSR 60 KQCNCKNSRC LKLYCECFAS GRYCDNCNCV NCFNNKASEA IRQSAVEAIL ERNPNAFRPK 120 IQGSEGGEQL QNVRLARDGS VRHTKGCNCK KSYCLKKYCE CFQAGIVCSE MCKCIDCKNY 180 EGSEQRSQVL ANQDFGANTT AATLTLGAQG QQTLTVKRPR LQQPGPHTPS HVPRLLVPRH 240 HQLATALPTP AGAPKPAHGM SHLGVALQPV HALGAAAALQ LAQPTRSSIF DVVNGVVKTN 300 MIEELCRLLI LVADEEASKY PARATAHTQQ QQQVSSAIDA AVDTTQQGGS QGHHDSGDNV 360 QGGLSNSNVG VDGEMPSKKL KLEDSVDDQV GGSRATPASA AKPTTPAAVA APNGVSTTGA 420 AAAQEGGQAD AATAMQQQQQ QQQQQAEPGA LMAAPASSSS PSSMYAAQER AVLMEFDQIV 480 QKVVDAADKK AGAAAGSSIN NTAAALQAAA ALQAAGGFQS LVGGGANGLS HPGVLMSSSH 540 GYPAGAVAQL RLPAALQPGQ AHAVRQLAAA QPQLAGASAP NLMGLTQQAM LLPSSAHAAA 600 YQLGQSLQLR GISQPFITAV SHPGGVSAAT PQHFAMLGLQ GALPPRAGGA LGQISVGMSG 660 QPLSAAQLLQ MSAAGQLPQG FMISSDGGAG PVAPGTGMIH LPGQYLSLMT TPGLETGDTA 720 GAGAAVTDMS GTQHIEVPHE GVTGMPQDVA VAEGTAVAEG PDPAPATHQH * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G20110.1 | 4e-44 | CPP family protein |