PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz01g34320.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

AP2

Protein Properties

Length: 1027aa MW: 109593 Da PI: 8.2121

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz01g34320.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45	2.6e-14	182	233	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkle 54 s+y+GV++dkk+ +W+++I++ + +s+g+f+t++ Aa+a+++a+ l Cz01g34320.t1 182 SQYRGVSYDKKKRKWRVQIKV----AalGKSGVSVGYFDTEDAAARAYDRAAIGLL 233 78*****************....44446******99*******98766 PP
2	AP2	22	4.2e-07	288	338	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 s+y GV ++++W A+I + k +lg++ t+eeAa+ +++ +l+ge Cz01g34320.t1 288 SKYLGVGSSNRKNQWQARILY------HgKVTHLGYYRTEEEAARVYDKVSISLHGE 338 7999777889**655......34*******************9999996 PP

Sequence ? help Back to Top
Protein Sequence Length: 1027 aa Download sequence
MSSEPFQVTS PSNYMNNSHM IKREDAQYHA SAAGPLTPGT WLPNGSHVLP GYPMGISNAG 60 YGMPQQQTGA YSHQNMEGFT PSVTASQYDP SSGQGMMHTG ASLHPYGCSS PGSNPAAMSQ 120 FGIPCSSSMV NNNTTDAIKV QPQMQQQAGP SAPAPRLSGS GGSQDDSGGQ AADAASAQVY 180 RSQYRGVSYD KKKRKWRVQI KVAALGKSGV SVGYFDTEDA AARAYDRAAI GLLGRQNCRA 240 ILNFPIEDYD QDSVPELVGK TREEVKATLK SERAKLPRRR LTNRRRTSKY LGVGSSNRKN 300 QWQARILYHG KVTHLGYYRT EEEAARVYDK VSISLHGENA QTNFPIDQYK HEVPTLQQRL 360 SGLTREELQR ALGVKPMDKS SKFRGVSKKK GKWEAKVMLN RKWAYRELFD TEAEAARAYD 420 SAVWRLKPKE AKSYVNFKDS CPPDVAEMLK KAEKEERNLA LHPSGLPLTA KPLIDAGLLF 480 DEDGVSIKHN MTRVISGGDL VSLGNAATNS SSEPSGGPGL TSAAGPAGDD QTSTMRKSAS 540 YSALSSLDSS AAAVAAAAAA NANMMGGGGF PGLPNFNTMG GMAGMPRVQS VPHSLQSYMH 600 MESTGSPVLH HHGLDSSNMM HGSGLPSYGG MMGAPSSMMH PMGMQAMKPA GTYWNTELSY 660 QASGNLGDHQ SYMGQRSRSC GNLALMGQGA GPTGAVNQQS PTLASPAAGM QGMFSSGSGE 720 FNLDQKPLLV RVGSEQHLIP ANPAAPSVRG MSRNASESQL SNMVPVSPSG MSPPTGQFMT 780 ASLMNHALQH KQQQQMAAMG MPRAQSMATL GSIDEMNATT SFPTPQLHMG SNVESGGGDY 840 GKRHGLVGMN MPNRASSPIT SLLSDWQSGK ILETNSMSYA MIPSQMMSEM NGTQHGMAPM 900 GVPMTMPYQS DASFNPQLVS NEEFAAAFGA VSQPMVGMQM PKWEDNLERP DSPFALRQGG 960 VQIGGEDLDV TMAFLTDGTS PDRRLTETLN LGSASDVGLP RLDSMDGSQL LLSAPSDGLM 1020 KMDESA*

Sequence ? help Back to Top

Protein Sequence Length: 1027 aa Download sequence

MSSEPFQVTS PSNYMNNSHM IKREDAQYHA SAAGPLTPGT WLPNGSHVLP GYPMGISNAG  60
YGMPQQQTGA YSHQNMEGFT PSVTASQYDP SSGQGMMHTG ASLHPYGCSS PGSNPAAMSQ  120
FGIPCSSSMV NNNTTDAIKV QPQMQQQAGP SAPAPRLSGS GGSQDDSGGQ AADAASAQVY  180
RSQYRGVSYD KKKRKWRVQI KVAALGKSGV SVGYFDTEDA AARAYDRAAI GLLGRQNCRA  240
ILNFPIEDYD QDSVPELVGK TREEVKATLK SERAKLPRRR LTNRRRTSKY LGVGSSNRKN  300
QWQARILYHG KVTHLGYYRT EEEAARVYDK VSISLHGENA QTNFPIDQYK HEVPTLQQRL  360
SGLTREELQR ALGVKPMDKS SKFRGVSKKK GKWEAKVMLN RKWAYRELFD TEAEAARAYD  420
SAVWRLKPKE AKSYVNFKDS CPPDVAEMLK KAEKEERNLA LHPSGLPLTA KPLIDAGLLF  480
DEDGVSIKHN MTRVISGGDL VSLGNAATNS SSEPSGGPGL TSAAGPAGDD QTSTMRKSAS  540
YSALSSLDSS AAAVAAAAAA NANMMGGGGF PGLPNFNTMG GMAGMPRVQS VPHSLQSYMH  600
MESTGSPVLH HHGLDSSNMM HGSGLPSYGG MMGAPSSMMH PMGMQAMKPA GTYWNTELSY  660
QASGNLGDHQ SYMGQRSRSC GNLALMGQGA GPTGAVNQQS PTLASPAAGM QGMFSSGSGE  720
FNLDQKPLLV RVGSEQHLIP ANPAAPSVRG MSRNASESQL SNMVPVSPSG MSPPTGQFMT  780
ASLMNHALQH KQQQQMAAMG MPRAQSMATL GSIDEMNATT SFPTPQLHMG SNVESGGGDY  840
GKRHGLVGMN MPNRASSPIT SLLSDWQSGK ILETNSMSYA MIPSQMMSEM NGTQHGMAPM  900
GVPMTMPYQS DASFNPQLVS NEEFAAAFGA VSQPMVGMQM PKWEDNLERP DSPFALRQGG  960
VQIGGEDLDV TMAFLTDGTS PDRRLTETLN LGSASDVGLP RLDSMDGSQL LLSAPSDGLM  1020
KMDESA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	3e-18	AP2 family protein