PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY69347.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 355aa    MW: 39935.8 Da    PI: 5.7522
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY69347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.83.9e-13156200755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + Er+RR ++N++f+ Lr l+P++    + K + a+++  A+eYIk+Lq
  GAY69347.1 156 ISERQRRVEMNDKFAVLRNLVPNP----NNKGDRASVVGDACEYIKELQ 200
                 67*********************9....99******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MYEEIADFFD PNSMTEDAAV AFNGENFNPI NTHLIHDPNQ VLQYEQSNWD SQQANGQQAP  60
DLFNLLHLSP GCHGLTGHLP SSSIAPPALY DPIFHSNLPS QQPPLFGEFF QSSNYEDGNS  120
GHFNNCVLDE FNGDIGMAFT GTKRVKATGK AKKPIISERQ RRVEMNDKFA VLRNLVPNPN  180
NKGDRASVVG DACEYIKELQ RSINELKSLV ERKRFAREIR SNNERHNIEG CDHDMKPAPL  240
VDPNNTASLR SSWLQRKSKD IEVDVRIVDD EVTVKILQRK KIDNCLLFLS KVFDEMQLDL  300
QHVAGGHIGD YYSFLLNSKI HEGSYVYAGA IVNKLIEVMD RQYAAASIAP INCSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-64bHLH family protein