PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY69328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 30152.2 Da PI: 9.9615 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 137.5 | 8.5e-43 | 20 | 150 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppG+rF Ptd+elv +yLk+kv +k l+ + i ++++y++ P+dL + ++++eek +yfF++rd+ky++g+r+nra+ +gyWkatg d+ + + GAY69328.1 20 PPGYRFCPTDKELVLDYLKNKVMNKLLPP-NKIMDINLYNHGPQDLSAiyrekmRIEQEEKTLYFFTPRDRKYPNGTRPNRAAGRGYWKATGVDNIIGR 117 9*************************999.77**************85567766666677788******************************988887 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 k++ +g +k+Lv+y+g +k++kt+W+mheyr+ GAY69328.1 118 -KENPIGYRKSLVYYQGYPKKSKKTNWIMHEYRI 150 .999****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MVNVEQQQRV ATLKYLNSFP PGYRFCPTDK ELVLDYLKNK VMNKLLPPNK IMDINLYNHG 60 PQDLSAIYRE KMRIEQEEKT LYFFTPRDRK YPNGTRPNRA AGRGYWKATG VDNIIGRKEN 120 PIGYRKSLVY YQGYPKKSKK TNWIMHEYRI DHKSPARSST AAPHDMKLDD WVLCKVYLKD 180 KKSDKDNREA TSINTDATST NPSISSSISQ SPPLLMQTTY NYSNVPYVHG STSSATPPLH 240 QGNNNFLHST IPLFFFEPNM N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 4e-53 | NAC family protein |