PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY68982.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 350aa MW: 39627.9 Da PI: 5.8459 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.9 | 9.9e-54 | 6 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+kv+g ++el evi+ v++yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++v+++++ GAY68982.1 6 LPPGFRFHPTDEELVGYYLKRKVDGLQIEL-EVIPVVELYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQST 103 79****************************.99**************95344555788***************************************** PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g +ktLvfy+grap g +tdWvmheyrl GAY68982.1 104 SATGYRKTLVFYRGRAPLGDRTDWVMHEYRL 134 *****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MGGASLPPGF RFHPTDEELV GYYLKRKVDG LQIELEVIPV VELYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKVVC QSTSATGYRK TLVFYRGRAP 120 LGDRTDWVMH EYRLCDDVSH GSPNFWGAFA LCRVVKKNEN AQKTSPPSYG EPKGKRVGSS 180 SSIVDLTSSK ACNGPLSISS DISSQASYLY NESRYSSPIT SPYPYEVSTV PESEHAPMET 240 NPANLWVSPD LILDSSKDYP QTHEAVSEYN PNYEFQNSVT PCHPFEHKDF SPGSSYSNFN 300 GEIELAEDLS RFGCMSPYSI HANYTGFYGN EDMPYQGYDH SNSPDYSSLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 1e-108 | NAC family protein |