PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY68653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | DBB | ||||||||
Protein Properties | Length: 236aa MW: 25586.9 Da PI: 6.2876 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.4 | 2.2e-06 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC dC + H+ H++ pl GAY68653.1 4 QCNGCEAAEAKVLCCADEAALCWDCDRKVHSAnmlakkHQRLPL 47 6******99*********************66888888988775 PP | |||||||
2 | zf-B_box | 29.2 | 1.9e-09 | 52 | 95 | 1 | 38 |
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 s+++kC+ ++e +fC +++ l+C++C +++H H+ GAY68653.1 52 SQMPKCDICQETTGYFFCLEDRALFCRKCDVAIHTTnayvsgHQ 95 689********99*********************5555666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MRIQCNGCEA AEAKVLCCAD EAALCWDCDR KVHSANMLAK KHQRLPLSHS SSQMPKCDIC 60 QETTGYFFCL EDRALFCRKC DVAIHTTNAY VSGHQRFLLT GVKVGLGATE PCVSTTMNKS 120 DSIENASETE SSQPISKRNA SIPTACEANG MLHGQIGRVE TVSAPATSKM PSVTGDTTTV 180 NNIPDWHLDD YLTPTDFSPN YVLMDNLSFS KSHSAFGGVV RALGGQQFEP PQVQCG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78600.1 | 3e-66 | DBB family protein |