PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY68621.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 341aa MW: 39104.2 Da PI: 10.2731

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY68621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.1	1.6e-19	45	121	9	90
FAR1 9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++GF ++k+++++sk +ge+++++f+C+++g +++++ ++r+ +++Cka l+vk+++ gkw+v+++ +eHnHel GAY68621.1 45 TTGFGISKKSNRRSKLSGEFIDAKFTCTRYGIKQKSSAI-----NQRPCLKVDCKALLHVKRNSCGKWYVQNFIKEHNHELY 121 68****************************9998766.....99********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MARMAIKDHF SKRSATVVMN LQIDLNTNLD ECGNVIDGNV VNENTTGFGI SKKSNRRSKL 60 SGEFIDAKFT CTRYGIKQKS SAINQRPCLK VDCKALLHVK RNSCGKWYVQ NFIKEHNHEL 120 YPSHAHYFPC HRSIAFSNTH SINMLHFSRN FKLKFEEHQH VCRHVLCVLQ SLGVFNIPPH 180 YILKQWSKDA KSLDYTSSTS NIPKGMQFKK QRFDKLFYQA TKLSKEGSLS SGSFNIAYCA 240 LQDALEKCIR VNRSLKEHEV ELDGAYKVDK ENIDDNLLHD ISLLDPQISS TKRAPKRMKK 300 GIEKCKKRIL NTKSRKATSS ILNFEITMRS GRALVLFKVV I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	2e-29	FAR1 family protein