PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY68477.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GRF

Protein Properties

Length: 332aa MW: 37635.8 Da PI: 8.8732

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY68477.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.3	7.3e-25	96	139	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e GAY68477.1 96 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 139 79***************************************987 PP
2	QLQ	58.9	1.5e-20	25	59	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky++++ PvPp+Ll+ i+ GAY68477.1 25 PFTASQWQELEHQALIFKYMVSGIPVPPDLLFTIK 59 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
FMGFRRDVRD RSCLGAGPEA TDRFPFTASQ WQELEHQALI FKYMVSGIPV PPDLLFTIKR 60 SYYFDRSPPS AAKHFTHQHQ HVEWNCFQVG LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS 120 KYCERHMHRG KNRSRKPVEL NTSTCTANKS SSALFYSSAK HQESFNLTHL VLDSGSGSGS 180 GSQSNTDLRS RYVYGPKEEV DEHAFFSEPS GKVRSFSAVS MDDSWQLTPL TMSSSCSSSS 240 SKQRSFSGLQ SDYSDLQLKS CADNKPKQQD KQPEEIPQKT VHRFFDEWPP KSRDSWLDLD 300 DKSSKNASLS TTSLSISIPS SHDFPIFSSR AP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-52	GRF family protein