PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67932.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 568aa MW: 62443.6 Da PI: 4.8477

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	96.8	2.2e-30	40	183	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTT..EEE---SSBTTTT...................... CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYg..Fkkvkdeekksks...................... 74 Fl+k+y++++d ++++++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+Y F ++++ +++ + GAY67932.1 40 FLSKTYDMVDDLATDSIVSWSPTSNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYTdlFWLLNNQMEQKGEmgkefksqvyhnlisknggkri 136 9******************999*******************************8668888888777666999***************** PP ...................XTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 75 ...................kekiweFkhksFkkgkkellekikrkks 102 +++ weF+++ F +g+k+ll++i r+k GAY67932.1 137 lfpfpplflltehqgfrkvDPDRWEFANEGFLRGQKHLLRSISRRKP 183 99999999998877765449**********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MDGAANRGGG AGDPSATGGG GTPPSQPTPV QNATNAPPPF LSKTYDMVDD LATDSIVSWS 60 PTSNSFVVWN PPEFARDLLP KYFKHNNFSS FVRQLNTYTD LFWLLNNQME QKGEMGKEFK 120 SQVYHNLISK NGGKRILFPF PPLFLLTEHQ GFRKVDPDRW EFANEGFLRG QKHLLRSISR 180 RKPAHGHGHQ QSHQQNAQSS SVGACVEVGK FGLEEEVERL KRDKNVLMQE LVRLRQQQQA 240 TDSQLQTMVQ RLQGMEQRHQ QMMAFLAKAV QSPGFLAQFV QQQNDSNKRI AEANKKRRIR 300 QEGVAEDDHA TTADGQIVKY QPSMNEAAKS MLRKIIKMES SQLESFNNNH DNYLIGDGAS 360 SSNTGSTSSR MSGVTLQEVP QTSGPYAPAA SGILADGPSA AATERQSSSR STASEKTTTD 420 QFPDINLLVA AQEATSLPIS ESDVIMPDLA QIPEIMPESM DGIPAESFIG SRMENGGYVD 480 PTSLIVNGSV PIEIDDISTD ADIDALLESS GLWDIVHSPV PEDIESTSVD VKTVGNEMQA 540 IENGWNKVQS MDQLTEQMGL LNSETKEV

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MDGAANRGGG AGDPSATGGG GTPPSQPTPV QNATNAPPPF LSKTYDMVDD LATDSIVSWS  60
PTSNSFVVWN PPEFARDLLP KYFKHNNFSS FVRQLNTYTD LFWLLNNQME QKGEMGKEFK  120
SQVYHNLISK NGGKRILFPF PPLFLLTEHQ GFRKVDPDRW EFANEGFLRG QKHLLRSISR  180
RKPAHGHGHQ QSHQQNAQSS SVGACVEVGK FGLEEEVERL KRDKNVLMQE LVRLRQQQQA  240
TDSQLQTMVQ RLQGMEQRHQ QMMAFLAKAV QSPGFLAQFV QQQNDSNKRI AEANKKRRIR  300
QEGVAEDDHA TTADGQIVKY QPSMNEAAKS MLRKIIKMES SQLESFNNNH DNYLIGDGAS  360
SSNTGSTSSR MSGVTLQEVP QTSGPYAPAA SGILADGPSA AATERQSSSR STASEKTTTD  420
QFPDINLLVA AQEATSLPIS ESDVIMPDLA QIPEIMPESM DGIPAESFIG SRMENGGYVD  480
PTSLIVNGSV PIEIDDISTD ADIDALLESS GLWDIVHSPV PEDIESTSVD VKTVGNEMQA  540
IENGWNKVQS MDQLTEQMGL LNSETKEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-126	HSF family protein