PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67931.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 560aa MW: 61488.4 Da PI: 4.7515

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	98	9.2e-31	40	175	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTT..EEE---SSBTTTT...................... CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYg..Fkkvkdeekksks...................... 74 Fl+k+y++++d ++++++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+Y F ++++ +++ + GAY67931.1 40 FLSKTYDMVDDLATDSIVSWSPTSNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYTdlFWLLNNQMEQKGEmgkefksqnggkrilfpfpplf 136 9******************999*******************************8668888888777666999*******99999999 PP ...........XTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 75 ...........kekiweFkhksFkkgkkellekikrkks 102 +++ weF+++ F +g+k+ll++i r+k GAY67931.1 137 lltehqgfrkvDPDRWEFANEGFLRGQKHLLRSISRRKP 175 9998877765449*********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MDGAANRGGG AGDPSATGGG GTPPSQPTPV QNATNAPPPF LSKTYDMVDD LATDSIVSWS 60 PTSNSFVVWN PPEFARDLLP KYFKHNNFSS FVRQLNTYTD LFWLLNNQME QKGEMGKEFK 120 SQNGGKRILF PFPPLFLLTE HQGFRKVDPD RWEFANEGFL RGQKHLLRSI SRRKPAHGHG 180 HQQSHQQNAQ SSSVGACVEV GKFGLEEEVE RLKRDKNVLM QELVRLRQQQ QATDSQLQTM 240 VQRLQGMEQR HQQMMAFLAK AVQSPGFLAQ FVQQQNDSNK RIAEANKKRR IRQEGVAEDD 300 HATTADGQIV KYQPSMNEAA KSMLRKIIKM ESSQLESFNN NHDNYLIGDG ASSSNTGSTS 360 SRMSGVTLQE VPQTSGPYAP AASGILADGP SAAATERQSS SRSTASEKTT TDQFPDINLL 420 VAAQEATSLP ISESDVIMPD LAQIPEIMPE SMDGIPAESF IGSRMENGGY VDPTSLIVNG 480 SVPIEIDDIS TDADIDALLE SSGLWDIVHS PVPEDIESTS VDVKTVGNEM QAIENGWNKV 540 QSMDQLTEQM GLLNSETKEV

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MDGAANRGGG AGDPSATGGG GTPPSQPTPV QNATNAPPPF LSKTYDMVDD LATDSIVSWS  60
PTSNSFVVWN PPEFARDLLP KYFKHNNFSS FVRQLNTYTD LFWLLNNQME QKGEMGKEFK  120
SQNGGKRILF PFPPLFLLTE HQGFRKVDPD RWEFANEGFL RGQKHLLRSI SRRKPAHGHG  180
HQQSHQQNAQ SSSVGACVEV GKFGLEEEVE RLKRDKNVLM QELVRLRQQQ QATDSQLQTM  240
VQRLQGMEQR HQQMMAFLAK AVQSPGFLAQ FVQQQNDSNK RIAEANKKRR IRQEGVAEDD  300
HATTADGQIV KYQPSMNEAA KSMLRKIIKM ESSQLESFNN NHDNYLIGDG ASSSNTGSTS  360
SRMSGVTLQE VPQTSGPYAP AASGILADGP SAAATERQSS SRSTASEKTT TDQFPDINLL  420
VAAQEATSLP ISESDVIMPD LAQIPEIMPE SMDGIPAESF IGSRMENGGY VDPTSLIVNG  480
SVPIEIDDIS TDADIDALLE SSGLWDIVHS PVPEDIESTS VDVKTVGNEM QAIENGWNKV  540
QSMDQLTEQM GLLNSETKEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-127	HSF family protein