PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67856.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 395aa MW: 45013.5 Da PI: 7.2798

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.9	2.4e-50	26	151	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ ++s++++ + GAY67856.1 26 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAVGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSI 123 79*************************.89***********8777899***************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+g+apkg +t+W+m+eyrl GAY67856.1 124 GLKKTLVFYSGKAPKGIRTSWIMNEYRL 151 ************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MSMSMSISMS NNNDSKDDDH EHDVVMPGFR FHPTEEELVE FYLRRKVEGK RFNVELITFL 60 DLYRYDPWEL PALAAVGEKE WFFYVPRDRK YRNGDRPNRV TTSGYWKATG ADRMIKSENS 120 RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPQHETERYQ KAEISLCRVH KRPGVEDHTS 180 LPRCLPTPKA SSSRTGSSRS TTRPDKILYY HHRRHGIERL QGFGGQSSHQ QMEMVTDEKM 240 STNTDQTDGS SSSCSDVAAV LGLSKQNVYR PNMASITTSL LGLPSSIMEE QAAASTLVPS 300 CTTTTLFPVA LSSSSSSSLI YSDAADEFHG LLTYPQASMN HHQQYYNIDH HLHLQELQPQ 360 SLNLLATPLP AAFSDRLWEW NPILEASREY NDPFK

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MSMSMSISMS NNNDSKDDDH EHDVVMPGFR FHPTEEELVE FYLRRKVEGK RFNVELITFL  60
DLYRYDPWEL PALAAVGEKE WFFYVPRDRK YRNGDRPNRV TTSGYWKATG ADRMIKSENS  120
RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPQHETERYQ KAEISLCRVH KRPGVEDHTS  180
LPRCLPTPKA SSSRTGSSRS TTRPDKILYY HHRRHGIERL QGFGGQSSHQ QMEMVTDEKM  240
STNTDQTDGS SSSCSDVAAV LGLSKQNVYR PNMASITTSL LGLPSSIMEE QAAASTLVPS  300
CTTTTLFPVA LSSSSSSSLI YSDAADEFHG LLTYPQASMN HHQQYYNIDH HLHLQELQPQ  360
SLNLLATPLP AAFSDRLWEW NPILEASREY NDPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-111	NAC family protein