PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67855.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 407aa MW: 46510.7 Da PI: 7.318

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.8	2.6e-50	32	157	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ ++s++++ + GAY67855.1 32 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSI 129 79*************************.89***********8778899***************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+g+apkg +t+W+m+eyrl GAY67855.1 130 GLKKTLVFYSGKAPKGIRTSWIMNEYRL 157 ************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MAIAAANMSN NNESNDNENN DNKDDHEHDV VMPGFRFHPT EEELVEFYLR RKVEGKRFNV 60 ELITFLDLYR YDPWELPALA AIGEKEWFFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM 120 IKSENSRSIG LKKTLVFYSG KAPKGIRTSW IMNEYRLPQH ETERYQKAEI SLCRVYKRPG 180 VEDHPSLPRS LPTSRASSSR SVSSMSAQSD KRLDPHHHHQ FGIERFQALS GQSSQQQMDI 240 AAEKMSTNTD QTDRSSSCSD VTTVLGLSKQ NVYRPNMASV SSALGLPPSL MEEQAASLTL 300 VPNCTTTLFP VALSTSSSSA ASSNATDEFH RLLAYQQASM NHQQQYYNYQ HHHQQQQHHS 360 HFPQLPPQSQ PLSVNMLPSP LPAAFSDRLW EWNPIPEANR EYNDPFK

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MAIAAANMSN NNESNDNENN DNKDDHEHDV VMPGFRFHPT EEELVEFYLR RKVEGKRFNV  60
ELITFLDLYR YDPWELPALA AIGEKEWFFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM  120
IKSENSRSIG LKKTLVFYSG KAPKGIRTSW IMNEYRLPQH ETERYQKAEI SLCRVYKRPG  180
VEDHPSLPRS LPTSRASSSR SVSSMSAQSD KRLDPHHHHQ FGIERFQALS GQSSQQQMDI  240
AAEKMSTNTD QTDRSSSCSD VTTVLGLSKQ NVYRPNMASV SSALGLPPSL MEEQAASLTL  300
VPNCTTTLFP VALSTSSSSA ASSNATDEFH RLLAYQQASM NHQQQYYNYQ HHHQQQQHHS  360
HFPQLPPQSQ PLSVNMLPSP LPAAFSDRLW EWNPIPEANR EYNDPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-108	NAC family protein