PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67277.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GRF

Protein Properties

Length: 356aa MW: 39152.8 Da PI: 9.4496

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	71.9	7.4e-23	74	118	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH++r+r rsrk++e+ GAY67277.1 74 DPEPGRCRRTDGKKWRCSKDAHPNSKYCERHMNRSRYRSRKPVES 118 79****************************************986 PP
2	QLQ	59.2	1.2e-20	13	47	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+++L++Q+l++KyL a++PvPp+Ll++i+ GAY67277.1 13 PFTASQWHELEHQALIFKYLKAGLPVPPDLLVPIR 47 9********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MSGSGSLSSS VAPFTASQWH ELEHQALIFK YLKAGLPVPP DLLVPIRTSL KFLSSSLFHH 60 PTFGYCSYFG KKIDPEPGRC RRTDGKKWRC SKDAHPNSKY CERHMNRSRY RSRKPVESQN 120 TSQSLSTTVG VDIGGNRSSI GSGGGGGSRS LSFQNPPLQP LGTREGLCFR SNMSQSQMAA 180 IPYGIPNKEY SGQYRLQELK PEGNDGVLSM ASESLRGFTM NSSVDNSWCV TTSGSSSIPL 240 SDQRGGAFLQ NSCLPMQTLQ DFDSLIGNGA TSKQQQQHYF FGREFDSSRS QKQEHQALQP 300 LPDELPKTID FGYYLDDQRA NKSSLSTTQL SMSTPIASSK FFETSAHSSK GKPVPI

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MSGSGSLSSS VAPFTASQWH ELEHQALIFK YLKAGLPVPP DLLVPIRTSL KFLSSSLFHH  60
PTFGYCSYFG KKIDPEPGRC RRTDGKKWRC SKDAHPNSKY CERHMNRSRY RSRKPVESQN  120
TSQSLSTTVG VDIGGNRSSI GSGGGGGSRS LSFQNPPLQP LGTREGLCFR SNMSQSQMAA  180
IPYGIPNKEY SGQYRLQELK PEGNDGVLSM ASESLRGFTM NSSVDNSWCV TTSGSSSIPL  240
SDQRGGAFLQ NSCLPMQTLQ DFDSLIGNGA TSKQQQQHYF FGREFDSSRS QKQEHQALQP  300
LPDELPKTID FGYYLDDQRA NKSSLSTTQL SMSTPIASSK FFETSAHSSK GKPVPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-37	GRF family protein