PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67023.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 421aa MW: 46554.6 Da PI: 7.8016

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105	4e-33	188	244	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k GAY67023.1 188 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHPK 244 9*************************************.*************85 PP
2	WRKY	34.2	5e-11	388	408	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +Dg++WrKYGqK+vkg+++pr GAY67023.1 388 SDGFRWRKYGQKVVKGNPYPR 408 7*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MEIKEAERIV VAKPVPSRPT RSTFGSFSEL LEGPINASPP NVCSETAVMA IRPKTVRFKP 60 LVNCAPPNQT ELSRTAVCNS SDDVSKSDNK PTVIYKPLAR LVSRTTVSLL ENMGNFDISH 120 QHTQQSVEAQ HPSQDKQNFI SQISSNSNQV LPPLKEKDQT IESFKEASQN LEDPKYFPPV 180 AGDRPSYDGY NWRKYGQKQV KGSEYPRSYY KCTHPNCPVK KKVERSFDGQ IAEIVYKGEH 240 NHPKPQPPKR SSSATQGLGL GADGTGQDTN NTVWNTHLSE INEGSDGRVV NQNDLGVLAD 300 STCQAKPLPP FIPISTGANN TDGGTSDNSC GISGEFDEGR KALEGEDEQP RKRRRRSDHQ 360 SNEAGLSEDS ILEPRIVVQS STDSEILSDG FRWRKYGQKV VKGNPYPRLR LDNNLTSNIT 420 S

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MEIKEAERIV VAKPVPSRPT RSTFGSFSEL LEGPINASPP NVCSETAVMA IRPKTVRFKP  60
LVNCAPPNQT ELSRTAVCNS SDDVSKSDNK PTVIYKPLAR LVSRTTVSLL ENMGNFDISH  120
QHTQQSVEAQ HPSQDKQNFI SQISSNSNQV LPPLKEKDQT IESFKEASQN LEDPKYFPPV  180
AGDRPSYDGY NWRKYGQKQV KGSEYPRSYY KCTHPNCPVK KKVERSFDGQ IAEIVYKGEH  240
NHPKPQPPKR SSSATQGLGL GADGTGQDTN NTVWNTHLSE INEGSDGRVV NQNDLGVLAD  300
STCQAKPLPP FIPISTGANN TDGGTSDNSC GISGEFDEGR KALEGEDEQP RKRRRRSDHQ  360
SNEAGLSEDS ILEPRIVVQS STDSEILSDG FRWRKYGQKV VKGNPYPRLR LDNNLTSNIT  420
S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	351	355	RKRRR
2	351	357	RKRRRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	2e-82	WRKY family protein