PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY66806.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 29218.5 Da PI: 9.5318 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.2 | 2.2e-11 | 97 | 144 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++N+ f L ++P k ++Ka++Le +++++k+Lq GAY66806.1 97 QEHVIAERKRREKMNQQFIALSAVIPGI-----KQMNKASVLEGTIKHLKELQ 144 6799**********************97.....57*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDVDQDSTFI HQYQGNSQSN STTHGSMSFS GLISFQDTDS LASYYSQMSN PNSEYYCTIK 60 SEDKRASDEN LMAMKTRIVN KPGQGNRVAS RSPLQAQEHV IAERKRREKM NQQFIALSAV 120 IPGIKQMNKA SVLEGTIKHL KELQEREKKL VEQTKRKALE SVVSVKGSQQ TLPDIVVRVS 180 DNNVLIRIHC EKQNIGFISN ILSEIEKLHL VVINSRTIPF GNYALDITVV AQMEVEFCLT 240 VKELVKNLRL ALSKFIKLG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 103 | 108 | ERKRRE |
2 | 104 | 109 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 4e-50 | bHLH family protein |