PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY66765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 580aa MW: 63957.1 Da PI: 5.8462 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.7 | 1.5e-11 | 375 | 417 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L GAY66765.1 375 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 417 79*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 580 aa Download sequence |
MLSRLNGVVW MDGKEEEGSA AWARNNINNN SSNSINNNCN TNNMSCSNNN DNNNGVIENE 60 EEMGSLPGFK SMLEVEDDWY VTGNTSLNNH QDITFPPNLG DPTTDNLLLN AVDSSSSCSP 120 SSSVFNNFDA SQVHYFLPQK NSFSSFMNVV SNNNSLEHGF DLGEMGFLDT QATHALNRGN 180 GGILNGFNDL SANNQMNATN LCSDPQFGTN RTLQFPENGS SSFAGFRGFD ENNGNSLFLN 240 RSKLLRPLET FPSTGAQPTL FQKRAALRKN LGGNEASLGV LGTQNSQLLC GIESDKGKKE 300 LTEDNEKKRK LSISDDLEDV SVDGSGLNYD SDDFLENNKV EEMGKNGGSS SNAISTITGG 360 DQKGKKKGLP AKNLMAERRR RKKLNDRLYM LRSVVPKISK MDRASILGDA IEYLKELLQR 420 INDLHNELES TPPGSALTPS TSFYPLTPTP PALHSRIKDE LCPSSLPSPN GQPARVEVRV 480 REGRAVNIHM FCSRRPGLLL STMRALDNLG LDIQQAVISC FNGFAMDVFR AEQCKEGQDV 540 HPEQIKAVLL DSAGFHGMIG GEEQRHHRWS RRQRQRYFPL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 365 | 383 | KKKGLPAKNLMAERRRRKK |
2 | 377 | 384 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.1 | 1e-125 | bHLH family protein |