PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY65620.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

DBB

Protein Properties

Length: 707aa MW: 77454.1 Da PI: 7.016

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY65620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.4	1.1e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ GAY65620.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	25.1	3.5e-08	53	86	2	35
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 + + C+ ++ek + +fC +++ l+C+dC + +H+ GAY65620.1 53 KLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHS 86 6789***************************994 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCL SNKLPPCDIC 60 QEKAAFIFCV EDRALFCKDC DEPIHSPGSL SANHQRFLAT GIRVALSSSC SKDAERNISE 120 PPNQQASQTS VKMPTQQSSS ISSPWAVDDF LQFSDFESSG KKEQLEFGEL EWIADMGIFN 180 DQLPQEALAA AEVPQLPVSQ SNNLISSYRP TKFNMPYKKP RIEIPDDDDE HFTVPDLGVS 240 SIPTLSKAMD VQCFVLFGIE RCVTHAYSCI IHTTWSNKTT MPTVSAAVQR QGRIGHSDKS 300 RSSLRMISEA SWISNGALVP TIVHSATLAT DTQVLRLLKR SIDPNTIPRS SFLDSWDFKL 360 DPCESSGGQF LGILCSIPSD NSTSRITAIY LDSSGYDGFL TPSIGNLTEL TTLDLSRNNF 420 RGPIPDTVTD LRKLTTLYLP GNFFTGNIPV GITRLKKLQT LDLSHNSLSG IIPAQLSGLR 480 SLTALRLSHN AFSGKIPSLT GAWQLHTLDL DSNQLYGNLP KFPTSLRTLS LSHNLLSGHL 540 SSLRNLVNLK SLDLSSNRFT GAISHEVLTL PQVVSIDVSV NRLTAIEMTT LSGDTHLQEL 600 DVQGNLLRGH LPINLVSLRN LTSINLARNQ LSGHIPKVYG AKLGSSWRSL FLDHNFLWGN 660 LPPEFSSSIT RIRGSLAKNC LSCPETIRLC HGGQRPASEC VGQNDKE

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCL SNKLPPCDIC  60
QEKAAFIFCV EDRALFCKDC DEPIHSPGSL SANHQRFLAT GIRVALSSSC SKDAERNISE  120
PPNQQASQTS VKMPTQQSSS ISSPWAVDDF LQFSDFESSG KKEQLEFGEL EWIADMGIFN  180
DQLPQEALAA AEVPQLPVSQ SNNLISSYRP TKFNMPYKKP RIEIPDDDDE HFTVPDLGVS  240
SIPTLSKAMD VQCFVLFGIE RCVTHAYSCI IHTTWSNKTT MPTVSAAVQR QGRIGHSDKS  300
RSSLRMISEA SWISNGALVP TIVHSATLAT DTQVLRLLKR SIDPNTIPRS SFLDSWDFKL  360
DPCESSGGQF LGILCSIPSD NSTSRITAIY LDSSGYDGFL TPSIGNLTEL TTLDLSRNNF  420
RGPIPDTVTD LRKLTTLYLP GNFFTGNIPV GITRLKKLQT LDLSHNSLSG IIPAQLSGLR  480
SLTALRLSHN AFSGKIPSLT GAWQLHTLDL DSNQLYGNLP KFPTSLRTLS LSHNLLSGHL  540
SSLRNLVNLK SLDLSSNRFT GAISHEVLTL PQVVSIDVSV NRLTAIEMTT LSGDTHLQEL  600
DVQGNLLRGH LPINLVSLRN LTSINLARNQ LSGHIPKVYG AKLGSSWRSL FLDHNFLWGN  660
LPPEFSSSIT RIRGSLAKNC LSCPETIRLC HGGQRPASEC VGQNDKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31380.1	1e-102	DBB family protein