PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY65619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | DBB | ||||||||
Protein Properties | Length: 707aa MW: 77454.1 Da PI: 7.016 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 20.4 | 1.1e-06 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ GAY65619.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP | |||||||
2 | zf-B_box | 25.1 | 3.5e-08 | 53 | 86 | 2 | 35 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 + + C+ ++ek + +fC +++ l+C+dC + +H+ GAY65619.1 53 KLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHS 86 6789***************************994 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 707 aa Download sequence |
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCL SNKLPPCDIC 60 QEKAAFIFCV EDRALFCKDC DEPIHSPGSL SANHQRFLAT GIRVALSSSC SKDAERNISE 120 PPNQQASQTS VKMPTQQSSS ISSPWAVDDF LQFSDFESSG KKEQLEFGEL EWIADMGIFN 180 DQLPQEALAA AEVPQLPVSQ SNNLISSYRP TKFNMPYKKP RIEIPDDDDE HFTVPDLGVS 240 SIPTLSKAMD VQCFVLFGIE RCVTHAYSCI IHTTWSNKTT MPTVSAAVQR QGRIGHSDKS 300 RSSLRMISEA SWISNGALVP TIVHSATLAT DTQVLRLLKR SIDPNTIPRS SFLDSWDFKL 360 DPCESSGGQF LGILCSIPSD NSTSRITAIY LDSSGYDGFL TPSIGNLTEL TTLDLSRNNF 420 RGPIPDTVTD LRKLTTLYLP GNFFTGNIPV GITRLKKLQT LDLSHNSLSG IIPAQLSGLR 480 SLTALRLSHN AFSGKIPSLT GAWQLHTLDL DSNQLYGNLP KFPTSLRTLS LSHNLLSGHL 540 SSLRNLVNLK SLDLSSNRFT GAISHEVLTL PQVVSIDVSV NRLTAIEMTT LSGDTHLQEL 600 DVQGNLLRGH LPINLVSLRN LTSINLARNQ LSGHIPKVYG AKLGSSWRSL FLDHNFLWGN 660 LPPEFSSSIT RIRGSLAKNC LSCPETIRLC HGGQRPASEC VGQNDKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31380.1 | 1e-102 | DBB family protein |