PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY65617.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

DBB

Protein Properties

Length: 708aa MW: 77429.2 Da PI: 6.66

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY65617.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.9	7.2e-07	25	66	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ GAY65617.1 25 IQCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 66 57*****************************65667777765 PP
2	zf-B_box	25.1	3.5e-08	75	108	2	35
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 + + C+ ++ek + +fC +++ l+C+dC + +H+ GAY65617.1 75 KLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHS 108 6789***************************994 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MQNLTPLIFT DSPPIFSLAS EKMKIQCDVC EKAPATVICC ADEAALCAKC DVEVHAANKL 60 ASKHQRLLLQ CLSNKLPPCD ICQEKAAFIF CVEDRALFCK DCDEPIHSPG SLSANHQRFL 120 ATGIRVALSS SCSKDAERNI SEPPNQQASQ TSVKMPTQQS SSISSPWAVD DFLQFSDFES 180 SGKKEQLEFG ELEWIADMGI FNDQLPQEAL AAAEVPQLPK PRIEIPDDDD EHFTVPDLGV 240 SSIPTLSKAM DVQCFVLFGI ERCVTHAYSC IIHTTWSNKT TMPTVSAAVQ RQGRIGHSDK 300 SRSSLRMISE ASWISNGALV PTIVHSATLA TDTQVLRLLK RSIDPNTIPR SSFLDSWDFK 360 LDPCESSGGQ FLGILCSIPS DNSTSRITAI YLDSSGYDGF LTPSIGNLTE LTTLDLSRNN 420 FRGPIPDTVT DLRKLTTLYL PGNFFTGNIP VGITRLKKLQ TLDLSHNSLS GIIPAQLSGL 480 RSLTALRLSH NAFSGKIPSL TGAWQLHTLD LDSNQLYGNL PKFPTSLRTL SLSHNLLSGH 540 LSSLRNLVNL KSLDLSSNRF TGAISHEVLT LPQVVSIDVS VNRLTAIEMT TLSGDTHLQE 600 LDVQGNLLRG HLPINLVSLR NLTSINLARN QLSGHIPKVY GAKLGSSWRS LFLDHNFLWG 660 NLPPEFSSSI TRIRGSLAKN CLSCPETIRL CHGGQRPASE CVGQNDKE

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MQNLTPLIFT DSPPIFSLAS EKMKIQCDVC EKAPATVICC ADEAALCAKC DVEVHAANKL  60
ASKHQRLLLQ CLSNKLPPCD ICQEKAAFIF CVEDRALFCK DCDEPIHSPG SLSANHQRFL  120
ATGIRVALSS SCSKDAERNI SEPPNQQASQ TSVKMPTQQS SSISSPWAVD DFLQFSDFES  180
SGKKEQLEFG ELEWIADMGI FNDQLPQEAL AAAEVPQLPK PRIEIPDDDD EHFTVPDLGV  240
SSIPTLSKAM DVQCFVLFGI ERCVTHAYSC IIHTTWSNKT TMPTVSAAVQ RQGRIGHSDK  300
SRSSLRMISE ASWISNGALV PTIVHSATLA TDTQVLRLLK RSIDPNTIPR SSFLDSWDFK  360
LDPCESSGGQ FLGILCSIPS DNSTSRITAI YLDSSGYDGF LTPSIGNLTE LTTLDLSRNN  420
FRGPIPDTVT DLRKLTTLYL PGNFFTGNIP VGITRLKKLQ TLDLSHNSLS GIIPAQLSGL  480
RSLTALRLSH NAFSGKIPSL TGAWQLHTLD LDSNQLYGNL PKFPTSLRTL SLSHNLLSGH  540
LSSLRNLVNL KSLDLSSNRF TGAISHEVLT LPQVVSIDVS VNRLTAIEMT TLSGDTHLQE  600
LDVQGNLLRG HLPINLVSLR NLTSINLARN QLSGHIPKVY GAKLGSSWRS LFLDHNFLWG  660
NLPPEFSSSI TRIRGSLAKN CLSCPETIRL CHGGQRPASE CVGQNDKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31380.1	2e-93	DBB family protein