PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY65529.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 481aa MW: 52691.8 Da PI: 7.374 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.1 | 7.6e-09 | 292 | 339 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq GAY65529.1 292 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 339 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence |
MEKEDLLMNE GVNSTPPTWS SCNFSSEKVI TNCCLNPNWD YSMDQSDPFE AALSSIVSSP 60 AASNAPTTCS VIIPAGGGGD NVMIRELIGR LGSICNSGEV LPQSYIQAQN NNNSNTCCYS 120 TPLNSPPLPK LNLSMIRGSK SSNNLPIPAA DPGFAERAAR LSCFAGSQMN MNSSVSASDS 180 KKLRVSRSST PESNNNADSK EGSSLSEQIT SQTVTDSNPR KRKSIQRPKA KETPPTNDPK 240 VVAENPEDSN SMRSKQDENK SDSSKTKDNS KPVEPPKDYI HVRARRGQAT DSHSLAERVR 300 REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPRMDLNM 360 EALLSKDLFQ SCGYVQHSLY PGDCSVQTFP SRYQPQQGSH LTSSGINNNA ENQFSINALN 420 SSLHRNHNIQ LPPINGHGEV GPRVPSLWDD DLQSLVQMGF NQNQPRSLNG SMATTQMKIE 480 M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07340.1 | 5e-85 | bHLH family protein |