PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY65495.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 210aa MW: 24256.9 Da PI: 9.4765 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.4 | 8.8e-27 | 45 | 133 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ + ++s+r+g+i r++ C+keg+ + + k r++r++tr gCka+++vk +k+gkw++tk+++eHnH+l+ GAY65495.1 45 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLV 133 9**************************************99999998****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MMDSDEGAGA VEGSAGRQLI IFEGDSIREP CEGMEFDSEE AAKIFYDEYA RRVGFVMRVM 60 SCRRSERDGR ILARRLGCNK EGYCVSIRGK FGPVRKPRPS TREGCKAMIH VKFDKSGKWV 120 ITKFVKEHNH PLVVAPREAR QTMDEKDKKI QELTVELRNK KRLCALYQEQ LTTFMKVVEV 180 HSDHLSKKVQ NVINNLKEFE SIEKELSRNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-109 | FAR1 family protein |