PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY65397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 252aa MW: 28838 Da PI: 7.8958 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.5 | 2.8e-14 | 66 | 117 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + hn+ Er RR++iNs ++ Lr+llP a + kKls +++ ++ +YI +Lq GAY65397.1 66 KLYHNASERDRRKKINSLYSSLRSLLPVA--DQTKKLSIPATVSRVLKYIPELQ 117 567*************************6..48888***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MCALFPPFFP SLGWPLEINP ICHQQDYITE TIEESPQFPQ ESEPQAEFDR SASFSANSGD 60 PTMVKKLYHN ASERDRRKKI NSLYSSLRSL LPVADQTKKL SIPATVSRVL KYIPELQQQV 120 ERLMQKKEEL LSKISKPGEI SHQQHQRKIA IGSSLASISA SRLSDMEILI QISSYKVHKC 180 PLSKILFNLE EDGLVLVNAS FFESFQGRVF YNLHLQVKST YGLDCEVLNE KLKSFYNEKR 240 EDLFPSNFGC KN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 1e-57 | bHLH family protein |