PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY65368.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 341aa MW: 37607 Da PI: 7.5014 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.5 | 1.3e-09 | 60 | 109 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f eL l ++ +K++Ka+iL +v+ +k+L GAY65368.1 60 RKMQKADREKLRRDRLNEHFTELGNALDPD----RPKNDKATILADTVQLLKDL 109 5778899********************997....79***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MDPQLKNEAA LVQSIPPPNP TLLEYRQPQP PPDPRVPTTR PQSKSSQKNE GEVKDCAATR 60 KMQKADREKL RRDRLNEHFT ELGNALDPDR PKNDKATILA DTVQLLKDLT SQVEKLKTEH 120 AALTEESREL TQEKNDLREE KLSLRSEIEN LNIQYQQRVR AMVPWAAMDH SVMMAPPSYP 180 YPVPMPMPPG AIPMHPPMQP YPMFGNQNPG VIPNPCSTFV PYMGPNTLVE QQSAQYASAV 240 AQPSGRSQGS AKEDSGNKSS GESKIEKNED SNNVTTDLEL KTPGSTTDQD LPSGQRKSKK 300 SLRKENSFTN GSSSSRCSSS RSVQDSSSNS VAGGRKADDL G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.2 | 3e-84 | bHLH family protein |