PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65367.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 341aa    MW: 37607 Da    PI: 7.5014
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-0960109154
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL  +v+ +k+L
  GAY65367.1  60 RKMQKADREKLRRDRLNEHFTELGNALDPD----RPKNDKATILADTVQLLKDL 109
                 5778899********************997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDPQLKNEAA LVQSIPPPNP TLLEYRQPQP PPDPRVPTTR PQSKSSQKNE GEVKDCAATR  60
KMQKADREKL RRDRLNEHFT ELGNALDPDR PKNDKATILA DTVQLLKDLT SQVEKLKTEH  120
AALTEESREL TQEKNDLREE KLSLRSEIEN LNIQYQQRVR AMVPWAAMDH SVMMAPPSYP  180
YPVPMPMPPG AIPMHPPMQP YPMFGNQNPG VIPNPCSTFV PYMGPNTLVE QQSAQYASAV  240
AQPSGRSQGS AKEDSGNKSS GESKIEKNED SNNVTTDLEL KTPGSTTDQD LPSGQRKSKK  300
SLRKENSFTN GSSSSRCSSS RSVQDSSSNS VAGGRKADDL G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.23e-84bHLH family protein