PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65009.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 448aa    MW: 51539.2 Da    PI: 7.4074
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.89.3e-3251323128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                  Gf+F+P+d+ ++ ++Lk+k  + +++  + ik++ +i+++ePwdL +  k+++e++ wyfF +   ky++++r++r+t++g W  t +d ++ + ++ 
  GAY65009.1   5 LGFKFQPSDQLII-HFLKEKRLDPHFSH-HPIKDIgHICSLEPWDLAMesKTETEDQVWYFFYEPYYKYRESNRAHRKTEAGHWTITSRDSKIEA-RNG 100
                 6********8555.********999988.78****99*********84347777888*************************************9.888 PP

         NAM  99 lvglkktLvfykg..rapkgektdWvmheyrl 128
                 l+g+kk L+fy+    ++ + ktdW+mhey++
  GAY65009.1 101 LTGTKKFLTFYRRspCSKAAAKTDWIMHEYHV 132
                 9**********6522456677*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MESQLGFKFQ PSDQLIIHFL KEKRLDPHFS HHPIKDIGHI CSLEPWDLAM ESKTETEDQV  60
WYFFYEPYYK YRESNRAHRK TEAGHWTITS RDSKIEARNG LTGTKKFLTF YRRSPCSKAA  120
AKTDWIMHEY HVKDDPSYEK EFVLCRIQRK RNKRRKDGIS TIDEGEPSKQ LVSPPQQSPS  180
HSISNGYHSE QNTHTIPQPQ LQNHRSISFP TVQNTIYQSI RNDTPTQLSV SKHSISKRDH  240
NGENIPANQP LPQNHSKETT LKYQPQPPNH NSISYLGNRV EQNMYPLTNN LVIPNYPPTQ  300
QPQPDYNMIS HFGNPIKENS LTNPQLPPNS NLDSQLPPGH HSVTHDFAGN NFHEERLPFR  360
EIKSFGGYNR PNDASSSAVQ TPISQEQELN YSNSSIGTCD ISDCQIFSDE QVNNLINSLR  420
ALLDENSCEE TGKTLTPTLT HQRLMAKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.15e-26NAC family protein