PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY64997.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 512aa MW: 55324.4 Da PI: 7.7501 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 55.5 | 1.5e-17 | 86 | 202 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...............................rergferspkqCkekwenlnkrykkikege 68 +W++ + +L+ea++e+ ++l+rg+l++ +Weev++++ + + +s +qCk+k++nl+kryk + +++ GAY64997.1 86 EWSDTAIACLLEAYTEKLNQLNRGNLRGRDWEEVAEVVsercgggggnnnnnendnninnnnnssgekrEVVKAAKSVEQCKNKIDNLKKRYKVEVQRM 184 5*****************************************************************9755567789*********************** PP trihelix 69 kkrtsessstcpyfdqlea 87 ++ s +s++ +f+q+ea GAY64997.1 185 GSSGS-GTSNWLWFKQIEA 202 *9755.556*******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence |
MSSQDYPLIP ESHAPTRIPQ TTDSTAAANY YAHSAFTTNE DSDADKSGSG SGSGSGPKRN 60 PYYYKKQKTG ETATDYRVDY RKDREEWSDT AIACLLEAYT EKLNQLNRGN LRGRDWEEVA 120 EVVSERCGGG GGNNNNNEND NNINNNNNSS GEKREVVKAA KSVEQCKNKI DNLKKRYKVE 180 VQRMGSSGSG TSNWLWFKQI EAIMGTINNN HNNAISSSNY GLVNKSTGGG GSTEIVERNG 240 GAAATAMASA SPSPVAVSPF SRQARRYTPS TSTVTYNLKS KPQQNLKWQR VVFKISGSAL 300 VGNCHNIDPK VVMQIAREVA SACRLGVEVA IVLGGRNFFC GDSWLSDTGF DRPTAYQIGM 360 MATVMNSILL QSALEKLEIK TRVQSAFALP EVDEPYSRQR AIRHLEKGRV VIFGGIGAGT 420 GNPVFTTDAA AALRASELNA DAMVKGVSVN GIYDSHSGNG HVVPEHISYR EAVSGNFTSM 480 DTMAITYCEE NGIPVFNLLE PGNISSALCG GQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.1 | 1e-140 | Trihelix family protein |