PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64961.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 275aa    MW: 30701.6 Da    PI: 8.4637
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2681.8e-2182132256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  GAY64961.1  82 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDQAAYKLRGE 132
                 59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MFSQGLMSFE QQPISSLGLN HLTPSQILQI QAQINFQQQQ QQQVASLASR ASISSPKSNL  60
LSPKAVPMKH VSNAQVAKPT KLYRGVRQRH WGKWVAEIRL PKNRTRLWLG TFDTAEEAAL  120
AYDQAAYKLR GEFARLNFPH LKHHGAHVTG EFGDYKPLHA SVDAKLQAIC QNLALNNNVQ  180
KQIPKQQQQQ EAETKPVLLP ATAANIKVEN TSATSLSSPT PDHSLSDAGS SSPESDISFL  240
DFNDTKWETE MDAFGLEKYP SVEIDWEAIR KLSEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.13e-63ERF family protein