PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY64869.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 348aa MW: 39542.8 Da PI: 5.0247

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY64869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.1	3.1e-08	181	229	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 hn+ Er RR ++ + L llP + +++kK s +i +A eYI +L GAY64869.1 181 EHNAKERVRRMKLYATYGSLGALLPDS--ESKKKRSAPAIIDRALEYIPEL 229 6***********************6..47888************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MKKILRLLKL QIIIYVCFFD QEKSIFPLED DTTNCKRDSY LFLEQQNSGM DIPITEEYSM 60 TSSNKIHDTS GSSDLGTFLE QESSGLEPST DTELFLQNLV NYCNDDIFSN SAEASGDPWV 120 HGEASCSSLP LENHDSSRGL ESSFLSERET SAVAAPSINK ALPEKQLSAK KKERNNTTIE 180 EHNAKERVRR MKLYATYGSL GALLPDSESK KKRSAPAIID RALEYIPELE NEIEKLTLKK 240 NNMLSKIENK QHDNQNLQLE HEAPSVLVHE VEKGEVIIQI ICSPNDEKTL FSKLLQNLEA 300 KEKGIISVST LCVWEKRVCY HLHIRMKKDS LATDYVEVLR QDVISWLL

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MKKILRLLKL QIIIYVCFFD QEKSIFPLED DTTNCKRDSY LFLEQQNSGM DIPITEEYSM  60
TSSNKIHDTS GSSDLGTFLE QESSGLEPST DTELFLQNLV NYCNDDIFSN SAEASGDPWV  120
HGEASCSSLP LENHDSSRGL ESSFLSERET SAVAAPSINK ALPEKQLSAK KKERNNTTIE  180
EHNAKERVRR MKLYATYGSL GALLPDSESK KKRSAPAIID RALEYIPELE NEIEKLTLKK  240
NNMLSKIENK QHDNQNLQLE HEAPSVLVHE VEKGEVIIQI ICSPNDEKTL FSKLLQNLEA  300
KEKGIISVST LCVWEKRVCY HLHIRMKKDS LATDYVEVLR QDVISWLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71200.1	2e-28	bHLH family protein