PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY64846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 22830.7 Da PI: 5.1494 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.5e-17 | 44 | 93 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr + +++Wv+e+r+p +k+ r++lg++ t+e+Aa+a++ a+++l+g GAY64846.1 44 IFRGVRMRN-NNKWVCELREP---NKKSRIWLGTYPTPEMAARAHDVAALALRG 93 59****999.8*********8...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MDCISSQGEL LTHTQTTKFN YRLATSSPKK RAGRRVFRET RHPIFRGVRM RNNNKWVCEL 60 REPNKKSRIW LGTYPTPEMA ARAHDVAALA LRGKSACLNF ADSAWRLPVP ASADADDVRK 120 AAAEAAEAFR LSHDDEDQFE ENGLLPEKNV FYMDEEAVFD MPGLLVNMAE GLLLSPPPLL 180 IGCEYDDDDD DTKWNDYIWG H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 1e-47 | ERF family protein |