PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY64780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 223aa MW: 25792.6 Da PI: 5.0891 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.7 | 8.5e-18 | 39 | 91 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++f++eq++ Le +Fe++ p +++ ++A++lgL+ rqV +WFqN+Ra+ k GAY64780.1 39 KRRFSDEQVKSLEFMFESEARPESRMKHRMADELGLQPRQVAIWFQNKRARSK 91 568************************************************99 PP | |||||||
2 | HD-ZIP_I/II | 105.6 | 3.8e-34 | 38 | 129 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eqvk+LE +Fe+e + e++ K+++a eLglqprqva+WFqn+RAR ktkq+E++y++Lk+++++l+++ e +++e+++L +l++ GAY64780.1 38 NKRRFSDEQVKSLEFMFESEARPESRMKHRMADELGLQPRQVAIWFQNKRARSKTKQIEHEYTKLKAEFETLASSYELMRREHQSLLVQLQK 129 79************************************************************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MNSEIPERTA AAAVKFRGLN LDWTDMQQPI ASFGTGNNKR RFSDEQVKSL EFMFESEARP 60 ESRMKHRMAD ELGLQPRQVA IWFQNKRARS KTKQIEHEYT KLKAEFETLA SSYELMRREH 120 QSLLVQLQKL KNLLGKGHED TNENSGDGKS ENEITTESNE RPSQIYVPSS DDRSRNIEST 180 VIMKDFAATN VEEQTESSGN WCKFESGFLD ETSSTLPWWE LWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 5e-31 | HD-ZIP family protein |