PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY64707.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 247aa MW: 28468.7 Da PI: 4.7542

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY64707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.5	7.4e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv++yLk+k++g+++el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v+ ++ GAY64707.1 6 LPPGFRFHPTDEELVNYYLKRKINGQEIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTY-QS 102 79**************************.99**********84335556888**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLv+y+grap+g +tdWvmheyrl GAY64707.1 103 RAIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MAPVGLPPGF RFHPTDEELV NYYLKRKING QEIELDIIPE VDLYKCEPWE LAEKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVTY QSRAIGMKKT LVYYRGRAPQ 120 GIRTDWVMHE YRLDDKECDD ISAGIQDSYA LCRVFKKNGI CSEMEDQHGQ CSGLSSSLME 180 NSQQSHGISI ECETMSPDVP INSSSCIDEE DKDDSWMQFI TDDPWCSSNS TSTTFTGDQV 240 SHLEFTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-135	NAC family protein