PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64616.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 209aa    MW: 22773.7 Da    PI: 4.6289
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.70.0002367991954
                HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +f eL ++l +    + +K +Ka+iL  Av+ + +L
  GAY64616.1 67 RFLELGSMLEPG---RPPKTDKATILSDAVQMMEQL 99
                788999999997...78***************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MEIASSDNSD WLIDYSIVDD IPIAGNFDWP SQAAPAVNAS SAASVTIDCS FGDSDGPKEV  60
EAGSRKRFLE LGSMLEPGRP PKTDKATILS DAVQMMEQLR TEAQKLKQSN EDLQEKIKEL  120
KAEKNELRDE KQRLKADKEK LEQQVKAMSA PSGFLPHPSS MSAAFAAQSQ VAGNKLVPFI  180
GYPGVAMWQF MPPAAVDTSQ DHVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-66bHLH family protein