PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY64615.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 25808.2 Da PI: 5.213 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.8 | 1.5e-11 | 79 | 125 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRdr+N++f eL ++l + + +K +Ka+iL Av+ + +L GAY64615.1 79 KACREKLRRDRLNERFLELGSMLEPG---RPPKTDKATILSDAVQMMEQL 125 678**********************8...89***************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MEIASSDNSD WLIDYSIVDD IPIAGNFDWP SQAAPAVNAS SAASVTIDCS FGDSDGPKEV 60 EAGSRKRLRS ESCCVSGSKA CREKLRRDRL NERFLELGSM LEPGRPPKTD KATILSDAVQ 120 MMEQLRTEAQ KLKQSNEDLQ EKIKELKAEK NELRDEKQRL KADKEKLEQQ VKAMSAPSGF 180 LPHPSSMSAA FAAQSQVAGN KLVPFIGYPG VAMWQFMPPA AVDTSQDHVL RPPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 5e-84 | bHLH family protein |