PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64573.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 333aa    MW: 37216.5 Da    PI: 6.0079
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.66.9e-164695255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+  E+rRR++iN++f+ Lre++P++    ++K + a+ L +++eY+++Lq
  GAY64573.1 46 RSKHSVTEQRRRSKINERFQILREIIPHS----DQKRDTASFLLEVIEYVQYLQ 95
                899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MRTTKGNREE EEYEDDEFMS KKEAASNITN SNAKDGKNSD KASVIRSKHS VTEQRRRSKI  60
NERFQILREI IPHSDQKRDT ASFLLEVIEY VQYLQEKVQK YEVSYQDWSA EPTKLMPWRN  120
SHWRVQNFAT QPHAIKNGSG PGSMFPGKFD DNSISMSPTM LTSTQTPVES DPNRDIACKP  180
MDRQPEVANK GISISMPLQG NLPAPARSDS VLLHPLQRPV SDAQSNECPA TTDTMNQQEE  240
LTVEGGTINI SSIYSQGLLN NLTQALESAG IDLSQANISV QIDLGKRANR GLMPEASVAK  300
DLENPPSINQ AMAKLRDVSS GEDSDHSQKR LRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-118bHLH family protein