PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63999.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 337aa MW: 37696.4 Da PI: 6.1712

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	265	298	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps+ ++ LA+++gL+++q+ +WF N+R ++ GAY63999.1 265 WPYPSEPQKLALAESTGLDQKQINNWFINQRKRH 298 58*****************************885 PP
2	ELK	35.4	2.3e-12	218	239	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK+qLlr Ysg+LgsLkqEF+ GAY63999.1 218 DLKDQLLRRYSGSLGSLKQEFL 239 6********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MESGGTSSTR NPNCWMVLGE SSSNNNGNVN NNMNGSLCSI MMMNSSAGTT SDHNNKAFLP 60 PNLMMPPPQQ QEVQYDCTDN SSNSIKAGIF AHPHFPRLLA SYVNCQKVGA PAQVVARLDE 120 ACASGEAIMS RSSAGTAASR VGDDPALDQF MEAYCEMLTK YEQELTKPFK DASLFLSEID 180 AQLKTLTVSS NISGQSGSSE EEIDVKDHCI DPLAEDRDLK DQLLRRYSGS LGSLKQEFLK 240 KKKKGKLPKE ARQLLLDWWS RHHRWPYPSE PQKLALAEST GLDQKQINNW FINQRKRHWK 300 PSEDMQFVMM DAAYPQYYME NGVGNPFPMD CTTLARF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	8e-89	TALE family protein