PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63864.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 274aa    MW: 29826.6 Da    PI: 5.0358
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-18117167255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  GAY63864.1 117 SYRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEAAALAYDQAAFSMRG 167
                 69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MESSCLQISA ESPFNSSAFD DQSFSWDELL FSHNSSLPFN INDSEETLLL DVLAEGTTTG  60
TTKESSADSN SSNNNNNNNN NNNKEDHEVT SSTSSNYGGG KAAEEEGSPG KTSSDKSYRG  120
VRRRPWGKFA AEIRDSTRNG VRVWLGTFDS AEAAALAYDQ AAFSMRGSLA TLNFPADMVR  180
ESLQEMKYKC EDGCSPVVAL KKRHSIRKKS KSSSSSSVSN KKIKMNNQDR DHHQLAVAVG  240
SQLSQNVVVF EDLGADYLEQ LLMSSCGAAT ATIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-46ERF family protein